Examination of association with candidate genes for diabetic nephropathy in a Mexican American population

Clin J Am Soc Nephrol. 2010 Jun;5(6):1072-8. doi: 10.2215/CJN.06550909. Epub 2010 Mar 18.

Abstract

Background and objectives: Diabetic nephropathy (DN) is a multifactorial complication characterized by persistent proteinuria in susceptible individuals with type 1 and type 2 diabetes. Disease burden in people of Mexican-American descent is particularly high, but there are only a few studies that characterize genes for DN in this ethnic group. Two genes, carnosine dipeptidase 1 (CNDP1) and engulfment and cell motility 1 (ELMO1) previously showed association with DN in other ethnic groups. CNDP1 and ELMO1 were examined along with eight other genes that are less well characterized for DN in a new study of Mexican-Americans.

Design, setting, participants, & measurements: The target sample was patients of Mexican-American ancestry collected from three centers: 455 patients with DN and 437 controls with long-term diabetes but no incident nephropathy. Forty-two, 227, and 401 single nucleotide polymorphisms (SNPs) in CNDP1, ELMO1, and the other eight genes, respectively, were examined.

Results: No region in CNDP1 or ELMO1 showed significant P values. Of the other eight candidate genes, an association of DN with a SNP pair, rs2146098 and rs6659783, was found in hemicentin 1 (HMCN1) (unadjusted P = 6.1 x 10(-5)). Association with a rare haplotype in this region was subsequently identified.

Conclusions: The associations in CNDP1 or ELMO1 were not replicable; however, an association of DN with HMCN1 was found. Additional work at this and other loci will enable refinement of the genetic hypotheses regarding DN in the Mexican-American population to find therapies for this debilitating disease.

Publication types

  • Multicenter Study
  • Research Support, N.I.H., Extramural

MeSH terms

  • Adaptor Proteins, Signal Transducing / genetics*
  • Case-Control Studies
  • Chi-Square Distribution
  • Diabetic Nephropathies / ethnology
  • Diabetic Nephropathies / genetics*
  • Dipeptidases / genetics*
  • Genetic Association Studies
  • Genetic Predisposition to Disease
  • Haplotypes
  • Humans
  • Immunoglobulins / genetics*
  • Logistic Models
  • Mexican Americans / genetics*
  • Pedigree
  • Phenotype
  • Polymorphism, Single Nucleotide
  • Principal Component Analysis
  • Risk Assessment
  • Risk Factors
  • United States / epidemiology

Substances

  • Adaptor Proteins, Signal Transducing
  • ELMO1 protein, human
  • HMCN1 protein, human
  • Immunoglobulins
  • CNDP1 protein, human
  • Dipeptidases