Metagenomic study of single-nucleotide polymorphism within candidate genes associated with type 2 diabetes in an Indian population

Genet Mol Res. 2010 Oct 19;9(4):2060-8. doi: 10.4238/vol9-4gmr883.

Abstract

A population-based study was undertaken to evaluate linkage between single-nucleotide polymorphisms known as risk factors and type 2 diabetes in an Indian population. The study population was comprised of 40 normal glucose-tolerant individuals (21 males and 19 females) and 40 type 2 diabetes patients (21 males and 19 females). The genes and their corresponding single-nucleotide polymorphisms that we screened were VDR (rs 731236 and rs 1544410), IL-6 (rs 1800795), TCF7L2 (rs 7903146) and TNF-α (rs 1800629). The risk alleles were more frequent in the subjects with type 2 diabetes, except for the TNF-α gene, which was very infrequent in the population; the normal allele occurred at high and similar frequencies in both normal and diabetic individuals.

MeSH terms

  • Adult
  • Diabetes Mellitus, Type 2 / genetics*
  • Female
  • Genomics*
  • Humans
  • India
  • Male
  • Middle Aged
  • Polymorphism, Single Nucleotide*