DNase I-defined chromatin configuration of the human CD3 gene cluster

Nucleic Acids Res. 1990 Feb 11;18(3):459-64. doi: 10.1093/nar/18.3.459.

Abstract

The three CD3 genes on human chromosome 11q23 encode proteins (gamma, delta and epsilon) which form part of the antigen receptor on T lymphocytes. All three genes are clustered within 50 kb and are activated approximately contemporaneously during the early stages of T cell ontogeny. In order to pinpoint potential regulatory sequences important for locus activation and tissue-specific gene expression, the chromatin structure of almost 90 kb of this region has been probed in five cell lines using the endonuclease pancreatic DNase I. A set of DNase I hypersensitive (HS) sites has been defined in T cell chromatin, five of which were strong and not found in non-T cells, with the exception of the erythroleukaemia cell line K562, in which three sites were weakly expressed, correlating with a low level of delta mRNA. The subset of five HS sites map close to the CD3 genes and lie in regions which contain elements of defined function: the gamma promoter; the delta promoter and its 3' enhancer; and the epsilon promoter and its 3' enhancer. Since no further major T cell-restricted HS sites lie within the 90kb of the CD3 locus analysed, these five regions may contain all the sequences important for CD3 gene expression.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Antigens, Differentiation, T-Lymphocyte / genetics*
  • CD3 Complex
  • Chromatin / ultrastructure*
  • Cloning, Molecular
  • Cosmids
  • DNA Probes
  • Deoxyribonuclease I / metabolism*
  • Gene Expression
  • Humans
  • Leukemia, Erythroblastic, Acute
  • Multigene Family*
  • Nucleic Acid Hybridization
  • Promoter Regions, Genetic
  • Receptors, Antigen, T-Cell / genetics*
  • Restriction Mapping
  • T-Lymphocytes / ultrastructure
  • Tumor Cells, Cultured

Substances

  • Antigens, Differentiation, T-Lymphocyte
  • CD3 Complex
  • Chromatin
  • DNA Probes
  • Receptors, Antigen, T-Cell
  • Deoxyribonuclease I