Detection of the JAK2 mutation in myeloproliferative neoplasms by asymmetric PCR with unlabeled probe and high-resolution melt analysis

J Clin Lab Anal. 2011;25(4):300-4. doi: 10.1002/jcla.20474.

Abstract

Background: Several methods have been established to detect the JAK2 V617F mutation, a frequent event involved in the pathogenesis of myeloproliferative neoplasms (MPNs). High-resolution melt (HRM) analysis is a newly established technique without the requirement of any gel-based post-PCR handling.

Methods: An asymmetric PCR with unlabeled specific probe was developed and combined to HRM analysis o screen for JAK2 V617F mutation.

Results: Heterozygous mutation was easily distinguished from homozygous JAK2 for the obvious shape change. Homozygous JAK2 mutant can be also well separated from wild-type JAK2 in the presence of internal temperature calibrators. The easily recognizable and maximal sensitivity of HRM analysis was 5% for the detection of JAK2 V617F mutation, higher than 25% of direct sequencing. In the test of blind screening of 223 samples (111 Ph- MPNs, 60 Ph+ chronic myeloid leukemia, and 52 acute myeloid leukemia), JAK2 V617F mutations were found in 78 (70%) patients with MPNs, but in none with chronic and acute myeloid leukemia. HRM analysis of all cases was fully concordant with the results of PCR-RFLP and direct sequencing.

Conclusions: The HRM method with unlabeled probe could be used as convenient, sensitive and reliable diagnostic test for detection of JAK2 V617F mutation.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • DNA Mutational Analysis / methods*
  • DNA, Neoplasm / genetics
  • Heterozygote
  • Humans
  • Janus Kinase 2 / genetics*
  • Leukemia, Myeloid / enzymology
  • Leukemia, Myeloid / genetics
  • Mutation*
  • Myeloproliferative Disorders / enzymology
  • Myeloproliferative Disorders / genetics*
  • Polymerase Chain Reaction / methods*
  • Sensitivity and Specificity
  • Spectrometry, Fluorescence
  • Temperature

Substances

  • DNA, Neoplasm
  • JAK2 protein, human
  • Janus Kinase 2