Insights on neoplastic stem cells from gel-based proteomics of childhood germ cell tumors

Pediatr Blood Cancer. 2012 May;58(5):722-8. doi: 10.1002/pbc.23282. Epub 2011 Jul 26.

Abstract

Background: Childhood germ cell tumors (cGCTs), believed to arise from transformed primordial germ cells by an unknown mechanism, provide a unique model system for investigating cell signaling, pluripotency, and the microenvironment of neoplastic stem cells (NSCs) in vivo. This is the first report of proteomics of cGCTs.

Procedure: Four dysgerminomas (DYSs) and four childhood endodermal sinus tumors (cESTs), resembling self-renewing and differentiating NSCs, respectively, were selected. Proteomic studies were performed by 2-DE, SDS-PAGE, and cLC/MS/MS with protein database searching.

Results: 2-DE: 9 of 941 spots were differentially regulated with greater than a twofold change in spot volume for at least three of four gels in each group. Two of nine spots had P values for the t-test analysis of comparisons less than 0.001, while the remaining spots had P values from 0.013 to 0.191. Top-ranked proteins were identified in nine of nine spots with 4.0-38% sequence coverage. APOA1, CRK, and PDIA3 were up-regulated in cESTs. TFG, TYMP, VCP, RBBP, FKBP4, and BiP were up-regulated in DYSs. SDS-PAGE: Up-regulation of NF45 and FKBP4 was observed in four of four cESTs and DYSs, respectively. The fold-changes observed correspond with characteristic genetic changes.

Conclusion: Differential regulation of FKBP4 and NF45, combined with previous research on immunosuppressant binding, suggests that glucocorticoid receptor signaling merits further investigation in cGCTs and NSCs.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Electrophoresis, Gel, Two-Dimensional
  • Electrophoresis, Polyacrylamide Gel
  • Humans
  • Neoplasms, Germ Cell and Embryonal / chemistry*
  • Neoplasms, Germ Cell and Embryonal / metabolism
  • Neoplastic Stem Cells / chemistry*
  • Neoplastic Stem Cells / metabolism
  • Nuclear Factor 45 Protein / genetics
  • Proteomics / methods*
  • Receptors, Glucocorticoid / physiology
  • Retinoblastoma-Binding Protein 4 / genetics
  • Tacrolimus Binding Proteins / genetics

Substances

  • ILF2 protein, human
  • Nuclear Factor 45 Protein
  • RBBP4 protein, human
  • Receptors, Glucocorticoid
  • Retinoblastoma-Binding Protein 4
  • Tacrolimus Binding Proteins
  • tacrolimus binding protein 4