Abstract
MicroRNAs (miRNAs) are ∼22 nt non-coding RNAs that typically bind to the 3' UTR of target mRNAs in the cytoplasm, resulting in mRNA destabilization and translational repression. Here, we report that miRNAs can also regulate gene expression by targeting non-coding antisense transcripts in human cells. Specifically, we show that miR-671 directs cleavage of a circular antisense transcript of the Cerebellar Degeneration-Related protein 1 (CDR1) locus in an Ago2-slicer-dependent manner. The resulting downregulation of circular antisense has a concomitant decrease in CDR1 mRNA levels, independently of heterochromatin formation. This study provides the first evidence for non-coding antisense transcripts as functional miRNA targets, and a novel regulatory mechanism involving a positive correlation between mRNA and antisense circular RNA levels.
Publication types
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Research Support, Non-U.S. Gov't
MeSH terms
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Argonaute Proteins / metabolism*
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Argonaute Proteins / physiology
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Autoantigens / genetics
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Autoantigens / metabolism
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Base Sequence
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Gene Expression Regulation / drug effects
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Gene Expression Regulation / genetics
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HEK293 Cells
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Humans
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MicroRNAs / pharmacology*
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MicroRNAs / physiology
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Models, Biological
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Molecular Sequence Data
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Nerve Tissue Proteins / genetics
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Nerve Tissue Proteins / metabolism
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Nucleic Acid Conformation
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RNA / drug effects
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RNA / metabolism*
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RNA Cleavage / drug effects
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RNA Cleavage / genetics
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RNA Cleavage / physiology*
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RNA Interference / drug effects*
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RNA Splicing / genetics
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RNA Splicing / physiology
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RNA, Antisense / chemistry
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RNA, Antisense / metabolism*
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RNA, Circular
Substances
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AGO2 protein, human
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Argonaute Proteins
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Autoantigens
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CDR1 protein, human
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MIRN671 microRNA, human
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MicroRNAs
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Nerve Tissue Proteins
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RNA, Antisense
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RNA, Circular
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RNA