Molecular analysis of the β-globin gene cluster haplotypes in a Sudanese population with sickle cell anaemia

Int J Lab Hematol. 2012 Jun;34(3):262-6. doi: 10.1111/j.1751-553X.2011.01388.x. Epub 2012 Jan 20.

Abstract

Introduction: Sudan has a multiethnic population with a high frequency of Hb S, but little is known about the β(S) haplotypes in this population.

Methods: Blood samples from Sudanese Hb SS individuals were taken at two locations. Family history, age, ethnicity and clinical symptoms were recorded for each subject. Hb S was investigated using cellulose acetate electrophoresis (CAE) and cation exchange-high performance liquid chromatography. Dried blood samples from 93 individuals were used for β(S) haplotype identification based on restriction fragment length polymorphism analysis for seven restriction sites.

Results: Haplotypes could be assigned unequivocally to 143 chromosomes. Four of the five typical β(S) -globin haplotypes were identified. The most frequent was the Cameroon (35.0%), followed by the Benin (29.4%), the Senegal (18.2%) and the Bantu (2.8%). The Indian-Arab haplotype was not observed. Three atypical haplotypes were identified in 17 patients, occurring at a combined frequency of 14.6%. One of these, found at the high frequency of 11.8%, possibly represented a new Sudan haplotype.

Conclusion: β(S) Haplotyes were demonstrated successfully from dried blood samples. A new haplotype is apparent in Sudan, in addition to the four African haplotypes.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Anemia, Sickle Cell / blood*
  • Anemia, Sickle Cell / genetics*
  • Anemia, Sickle Cell / pathology
  • Haplotypes
  • Hemoglobin, Sickle / genetics*
  • Humans
  • Multigene Family
  • Polymorphism, Restriction Fragment Length
  • Sudan
  • beta-Globins / genetics*

Substances

  • Hemoglobin, Sickle
  • beta-Globins