Cost-effective HLA-Cw06:02 typing in a Caucasian population

Exp Dermatol. 2012 Mar;21(3):221-3. doi: 10.1111/j.1600-0625.2011.01423.x.

Abstract

Considering the clinical and genetic heterogeneity of psoriasis which may translate into distinct disease pathology and treatment response, correct typing of the main candidate gene HLA-C is critical but not trivial. To facilitate genotyping, we compared established techniques with our newly developed tool. Here, we propose that typing of four single nucleotide polymorphic markers within the HLA-C region correctly determines HLA-Cw*06:02 genotypes in psoriatic cases and healthy controls in a population of Caucasian origin. Typing of the SNPs presented herein proved to be precise, reliable, time and cost effective, and requiring low amount of DNA.

Publication types

  • Letter
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adult
  • Case-Control Studies
  • Cost-Benefit Analysis
  • Genetic Testing / economics*
  • Genetic Testing / methods
  • Genotype*
  • HLA-C Antigens / genetics*
  • Humans
  • Polymorphism, Single Nucleotide / genetics
  • Psoriasis / ethnology
  • Psoriasis / genetics*
  • Reproducibility of Results
  • White People / genetics*

Substances

  • HLA-C Antigens
  • HLA-C*06 antigen