Proteomic analysis of gastric cancer and immunoblot validation of potential biomarkers

World J Gastroenterol. 2012 Mar 21;18(11):1216-28. doi: 10.3748/wjg.v18.i11.1216.

Abstract

Aim: To search for and validate differentially expressed proteins in patients with gastric adenocarcinoma.

Methods: We used two-dimensional gel electrophoresis and mass spectrometry to search for differentially expressed proteins in patients with gastric adenocarcinoma. A set of proteins was validated with immunoblotting.

Results: We identified 30 different proteins involved in various biological processes: metabolism, development, death, response to stress, cell cycle, cell communication, transport, and cell motility. Eight proteins were chosen for further validation by immunoblotting. Our results show that gastrokine-1, 39S ribosomal protein L12 (mitochondrial precursor), plasma cell-induced resident endoplasmic reticulum protein, and glutathione S-transferase mu 3 were significantly underexpressed in gastric adenocarcinoma relative to adjacent non-tumor tissue samples. On the other hand, septin-2, ubiquitin-conjugating enzyme E2 N, and transaldolase were significantly overexpressed. Translationally controlled tumor protein was shown to be differentially expressed only in patients with cancer of the gastric cardia/esophageal border.

Conclusion: This work presents a set of possible diagnostic biomarkers, validated for the first time. It might contribute to the efforts of understanding gastric cancer carcinogenesis.

Keywords: Biomarkers; Gastric adenocarcinoma; Mass spectrometry; Proteome; Two-dimensional gel electrophoresis.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adult
  • Aged
  • Aged, 80 and over
  • Biomarkers, Tumor / metabolism*
  • Female
  • Humans
  • Immunoblotting / methods*
  • Male
  • Mass Spectrometry / methods
  • Middle Aged
  • Proteomics / methods*
  • Reproducibility of Results
  • Stomach Neoplasms / diagnosis*
  • Stomach Neoplasms / genetics
  • Stomach Neoplasms / metabolism*
  • Stomach Neoplasms / pathology

Substances

  • Biomarkers, Tumor