Phosphorylation regulates assembly of the caspase-6 substrate-binding groove

Structure. 2012 Apr 4;20(4):742-51. doi: 10.1016/j.str.2012.02.003. Epub 2012 Apr 3.

Abstract

Caspases, a family of apoptotic proteases, are increasingly recognized as being extensively phosphorylated, usually leading to inactivation. To date, no structural mechanism for phosphorylation-based caspase inactivation is available, although this information may be key to achieving caspase-specific inhibition. Caspase-6 has recently been implicated in neurodegenerative conditions including Huntington's and Alzheimer's diseases. A full understanding of caspase-6 regulation is crucial to caspase-6-specific inhibition. Caspase-6 is phosphorylated by ARK5 kinase at serine 257 leading to suppression of cell death via caspase-6 inhibition. Our structure of the fully inactive phosphomimetic S257D reveals that phosphorylation results in a steric clash with P201 in the L2' loop. Removal of the proline side chain alleviates the clash resulting in nearly wild-type activity levels. This phosphomimetic-mediated steric clash causes misalignment of the substrate-binding groove, preventing substrate binding. Substrate-binding loop misalignment appears to be a widely used regulatory strategy among caspases and may present a new paradigm for caspase-specific control.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Apoptosis / genetics
  • Binding Sites
  • Caspase 6 / chemistry*
  • Caspase 6 / genetics
  • Caspase 6 / metabolism
  • Crystallography, X-Ray
  • Escherichia coli
  • Humans
  • Models, Molecular
  • Molecular Mimicry
  • Neurodegenerative Diseases / genetics
  • Neurodegenerative Diseases / metabolism
  • Phosphorylation
  • Proline / chemistry*
  • Proline / metabolism
  • Protein Binding
  • Protein Kinases / chemistry*
  • Protein Kinases / genetics
  • Protein Kinases / metabolism
  • Protein Structure, Secondary
  • Protein Structure, Tertiary
  • Recombinant Proteins / chemistry
  • Recombinant Proteins / genetics
  • Recombinant Proteins / metabolism
  • Repressor Proteins / chemistry*
  • Repressor Proteins / genetics
  • Repressor Proteins / metabolism
  • Serine / chemistry*
  • Serine / metabolism
  • Signal Transduction / genetics

Substances

  • Recombinant Proteins
  • Repressor Proteins
  • Serine
  • Proline
  • Protein Kinases
  • NUAK1 protein, human
  • Caspase 6

Associated data

  • PDB/3S8E