Association of the -1072G/A polymorphism in the LTC4S gene with asthma in an Indian population

Int Arch Allergy Immunol. 2012;159(3):271-7. doi: 10.1159/000336675. Epub 2012 Jun 21.

Abstract

Background: Atopic asthma, the most common chronic disease affecting children and young adults, is a complex disorder with variable phenotypes. Cysteine leukotrienes (Cys-LTs) are powerful bronchoconstrictors and play a critical role in airway inflammation and remodeling that are characteristic of asthma.

Objective: To investigate the association of ALOX5, LTC4S and CysLTR2 gene polymorphisms with atopic asthma in an Indian population.

Methods: A total of 19 single nucleotide polymorphisms (SNPs) within these genes were genotyped in a family-based cohort (n = 239) and a case-control cohort (139 cases and 194 controls) followed by association analyses.

Results: We found a significant association of the -1072G/A (rs3776944) SNP with atopic asthma in the family-based association analysis (p = 0.0004). These results were also replicated in the case-control cohort (p = 0.009). The allele A was negatively associated with atopic asthma. We also noted a significant association in the two-locus (rs3776944G/A and rs730012A/C) haplotypic analysis of this gene both in the family-based (p = 0.03) and the case-control (p = 0.02) analyses.

Conclusion: This study supports the role of the LTC4S gene polymorphism in genetic susceptibility to atopic asthma in an Indian population.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • 5-Lipoxygenase-Activating Proteins / genetics
  • 5-Lipoxygenase-Activating Proteins / immunology
  • Adolescent
  • Adult
  • Alleles
  • Asthma / epidemiology*
  • Asthma / genetics*
  • Asthma / immunology
  • Case-Control Studies
  • Child
  • Child, Preschool
  • Cohort Studies
  • Female
  • Gene Frequency
  • Genetic Predisposition to Disease
  • Glutathione Transferase / genetics*
  • Glutathione Transferase / immunology
  • Haplotypes
  • Humans
  • India / epidemiology
  • Male
  • Middle Aged
  • Pedigree
  • Polymorphism, Single Nucleotide*
  • Receptors, Leukotriene / genetics
  • Receptors, Leukotriene / immunology
  • White People*

Substances

  • 5-Lipoxygenase-Activating Proteins
  • Receptors, Leukotriene
  • cysteinyl leukotriene receptor 2
  • Glutathione Transferase
  • leukotriene-C4 synthase