Exome sequencing: an efficient diagnostic tool for complex neurodegenerative disorders

Eur J Neurol. 2013 Mar;20(3):486-492. doi: 10.1111/j.1468-1331.2012.03883.x. Epub 2012 Oct 9.

Abstract

Background and purpose: Autosomal recessive cerebellar ataxia (ARCA) comprises a large and heterogeneous group of neurodegenerative disorders. We studied three families diagnosed with ARCA.

Methods: To determine the gene lesions responsible for their disorders, we performed high-density single-nucleotide polymorphism genotyping and exome sequencing.

Results: We identified a new mutation in the SACS gene and a known mutation in SPG11. Notably, we also identified a homozygous variant in APOB, a gene previously associated with ataxia.

Conclusions: These findings demonstrate that exome sequencing is an efficient and direct diagnostic tool for identifying the causes of complex and genetically heterogeneous neurodegenerative diseases, early-stage disease or cases with limited clinical data.

Publication types

  • Research Support, N.I.H., Intramural

MeSH terms

  • Adolescent
  • Age of Onset
  • Amino Acid Sequence
  • Apolipoproteins B / genetics
  • Base Sequence
  • Child
  • Child, Preschool
  • Exome / genetics*
  • Female
  • Genotype
  • Heat-Shock Proteins / genetics*
  • Humans
  • Infant
  • Male
  • Molecular Sequence Data
  • Pedigree
  • Polymorphism, Single Nucleotide
  • Proteins / genetics*
  • Spinocerebellar Ataxias / diagnosis*
  • Spinocerebellar Ataxias / genetics*
  • Young Adult

Substances

  • Apolipoproteins B
  • Heat-Shock Proteins
  • Proteins
  • SACS protein, human
  • SPG11 protein, human