SAP155-mediated c-myc suppressor far-upstream element-binding protein-interacting repressor splicing variants are activated in colon cancer tissues

Cancer Sci. 2013 Feb;104(2):149-56. doi: 10.1111/cas.12058. Epub 2012 Dec 4.

Abstract

The c-myc transcriptional suppressor, far-upstream element (FUSE)-binding protein (FBP)-interacting repressor (FIR), is alternatively spliced in colorectal cancer tissue (Matsushita et al., Cancer Res 2006). Recently, the knockdown of SAP155 pre-mRNA-splicing factor, a subunit of SF3b, was reported to disturb FIR pre-mRNA splicing and yield FIRΔexon2, an exon 2-spliced variant of FIR, which lacks c-myc repression activity. In the present study, novel splicing variants of FIR, Δ3 and Δ4, were also generated by SAP155 siRNA, and these variants were found to be activated in human colorectal cancer tissue. Furthermore, the expression levels of FIR variant mRNA were examined in the peripheral blood of colorectal cancer patients and healthy volunteers to assess its potency for tumor detection. As expected, circulating FIR variant mRNA in the peripheral blood of cancer patients were significantly overexpressed compared to that in healthy volunteers. In particular, the area under the receiving operating characteristic curve of FIR, FIRΔexon2 or FIRΔexon2/FIR, was greater than those of conventional carcinoembryonic antigen or carbohydrate antigen 19-9. In addition, FIRΔexon2 or FIR mRNA expression in the peripheral blood was significantly reduced after operative removal of colorectal tumors. Thus, circulating FIR and FIRΔexon2 mRNA are potential novel screening markers for colorectal cancer testing with conventional carcinoembryonic antigen and or carbohydrate antigen 19-9. Taken together, our results indicate that overexpression of FIR and its splicing variants in colorectal cancer directs feed-forward or addicted circuit c-myc transcriptional activation. Clinical implications for colorectal cancers of novel FIR splicing variants are also discussed in the present paper.

MeSH terms

  • Alternative Splicing
  • Animals
  • Antigens, Tumor-Associated, Carbohydrate / genetics
  • Antigens, Tumor-Associated, Carbohydrate / metabolism
  • Biomarkers, Tumor
  • COS Cells
  • Cell Line, Tumor
  • Chlorocebus aethiops
  • Colonic Neoplasms / genetics*
  • Colonic Neoplasms / metabolism
  • Exons / genetics
  • Genes, Tumor Suppressor
  • Guanine Nucleotide Exchange Factors / genetics*
  • Guanine Nucleotide Exchange Factors / metabolism
  • HCT116 Cells
  • HeLa Cells
  • Humans
  • Phosphoproteins / genetics*
  • Phosphoproteins / metabolism
  • Protein Isoforms
  • Proto-Oncogene Proteins c-myc / genetics*
  • Proto-Oncogene Proteins c-myc / metabolism
  • RNA Precursors / genetics
  • RNA Precursors / metabolism
  • RNA Splicing
  • RNA Splicing Factors
  • RNA, Messenger / genetics
  • RNA, Small Interfering / genetics
  • Rho Guanine Nucleotide Exchange Factors
  • Ribonucleoprotein, U2 Small Nuclear / genetics*
  • Ribonucleoprotein, U2 Small Nuclear / metabolism
  • Transcription, Genetic
  • Transcriptional Activation

Substances

  • Antigens, Tumor-Associated, Carbohydrate
  • Biomarkers, Tumor
  • FARP2 protein, human
  • Guanine Nucleotide Exchange Factors
  • Phosphoproteins
  • Protein Isoforms
  • Proto-Oncogene Proteins c-myc
  • RNA Precursors
  • RNA Splicing Factors
  • RNA, Messenger
  • RNA, Small Interfering
  • Rho Guanine Nucleotide Exchange Factors
  • Ribonucleoprotein, U2 Small Nuclear
  • SF3B1 protein, human
  • carbohydrate antigen 199, human