Development of a comprehensive real-time PCR assay for dystrophin gene analysis and prenatal diagnosis of Chinese families

Clin Chim Acta. 2013 Sep 23:424:33-8. doi: 10.1016/j.cca.2013.05.006. Epub 2013 May 13.

Abstract

Background: To develop a comprehensive method to analyze deletions or duplications of the dystrophin gene in both patients and carriers of Duchenne muscular dystrophy (DMD), likewise applied to prenatal diagnosis.

Methods: A total of thirty Chinese families were recruited, composed of 29 DMD affected males and 38 female relatives containing four pregnant women. Deletions were previously screened by multiplex PCR. A comprehensive real-time PCR assay using SYBR Green I dye was performed for the initial detection of duplications in patients with a seven-exon primer set, carrier detection for female relatives and prenatal diagnosis for the 4 of them. The results were later confirmed by multiple ligation-dependent probe amplification (MLPA) and linkage analysis.

Results: Three out of 4 duplications were first discovered by real-time PCR. Carrier status was ascertained in 22 and rejected in the remaining sixteen female relatives. Furthermore, 4 fetuses were diagnosed as two normal females, one normal male and one female carrier, respectively.

Conclusions: Our real-time PCR assay is useful in duplication screen with a detection rate of >70%, as well as rapid and reliable in both carrier detection and prenatal diagnosis of DMD families with known deletions and duplications.

Keywords: Carrier detection; Deletion; Duchenne muscular dystrophy; Duplication; Prenatal diagnosis; Real-time PCR.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adult
  • Asian People
  • Dystrophin / genetics*
  • Exons
  • Female
  • Fetus
  • Gene Deletion
  • Gene Dosage
  • Gene Duplication
  • Genetic Linkage
  • Heterozygote
  • Humans
  • Male
  • Muscular Dystrophy, Duchenne / diagnosis*
  • Muscular Dystrophy, Duchenne / ethnology
  • Muscular Dystrophy, Duchenne / genetics
  • Pedigree
  • Pregnancy
  • Prenatal Diagnosis / methods*
  • Real-Time Polymerase Chain Reaction / methods*

Substances

  • Dystrophin