Detecting gene mutations in Japanese Alzheimer's patients by semiconductor sequencing

Neurobiol Aging. 2014 Jul;35(7):1780.e1-5. doi: 10.1016/j.neurobiolaging.2014.01.023. Epub 2014 Jan 25.

Abstract

Alzheimer's disease (AD) is the most common form of dementia. To date, several genes have been identified as the cause of AD, including PSEN1, PSEN2, and APP. The association between APOE and late-onset AD has also been reported. We here used a bench top next-generation sequencer, which uses an integrated semiconductor device, detects hydrogen ions, and operates at a high-speed using nonoptical technology. We examined 45 Japanese AD patients with positive family histories, and 29 sporadic patients with early onset (<60-year-old). Causative mutations were detected in 5 patients in the familial group (11%). Three patients had a known heterozygous missense mutation in the PSEN1 gene (p.H163R). Two patients from 1 family had a novel heterozygous missense mutation in the PSEN1 gene (p.F386L). In the early onset group, 1 patient carrying homozygous APOEε4 had a novel heterozygous missense mutation in the PSEN2 gene (p.T421M). Approximately 43% patients were APOEε4 positive in our study. This new sequencing technology is useful for detecting genetic variations in familial AD.

Keywords: APOE; Alzheimer's disease; Ion sequencing technology; Mutations; PSEN1; PSEN2.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adult
  • Aged
  • Aged, 80 and over
  • Alzheimer Disease / genetics*
  • Apolipoprotein E4 / genetics*
  • Asian People
  • Female
  • Genetic Association Studies* / methods
  • Heterozygote
  • Humans
  • Male
  • Middle Aged
  • Mutation*
  • Mutation, Missense
  • Presenilin-1 / genetics*
  • Presenilin-2 / genetics*
  • Protons
  • Semiconductors*
  • Sequence Analysis, DNA / instrumentation*
  • Sequence Analysis, DNA / methods

Substances

  • Apolipoprotein E4
  • PSEN1 protein, human
  • PSEN2 protein, human
  • Presenilin-1
  • Presenilin-2
  • Protons