Association of a TNIP1 polymorphism with Vogt-Koyanagi-Harada syndrome but not with ocular Behcet's disease in Han Chinese

PLoS One. 2014 May 2;9(5):e95573. doi: 10.1371/journal.pone.0095573. eCollection 2014.

Abstract

Objectives: The aim of the study was to investigate the association of TNFα-induced protein 3 interacting with protein 1 (TNIP1) gene polymorphisms with Vogt-Koyanagi-Harada (VKH) syndrome and Behcet's disease (BD) in a Han Chinese population.

Methods: A total of 656 BD patients, 961 VKH syndrome patients and 1534 healthy controls were included in this two-stage case control study. Seven SNPs, including rs17728338, rs7708392, rs10036748, rs3762999, rs999556, rs4958881 and rs3792783, belonging to TNIP1 were genotyped and analyzed by the polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) method. The data were analyzed by using the χ2 or Fisher's exact test and corrected for multiple comparisons by the Bonferroni method.

Results: A significantly increased frequency of the GG genotype and a decreased frequency of the AG genotype of rs17728338 were found in VKH patients (Pc = 0.038 OR = 1.934, 95% CI = 1.438 ∼ 2.601). No significant difference was noted in allele or genotype frequencies of rs7708392, rs10036748, rs3762999, rs999556, rs4958881 and rs3792783, between VKH patients and healthy controls (Pc>0.05). No significant difference was noted in allele or genotype frequencies of the tested 7 SNPs between BD patients and healthy controls. Analysis of extraocular clinical findings, did not reveal an association of the TNIP1 gene polymorphisms with BD or VKH syndrome subgroups.

Conclusion: A TNIP1 polymorphism may be a risk factor for VKH syndrome in Han Chinese.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adult
  • Asian People / ethnology*
  • Asian People / genetics
  • Behcet Syndrome / genetics*
  • Case-Control Studies
  • DNA-Binding Proteins / genetics*
  • Ethnicity / genetics*
  • Female
  • Gene Frequency
  • Genetic Predisposition to Disease / genetics
  • Humans
  • Male
  • Polymorphism, Single Nucleotide*
  • Uveomeningoencephalitic Syndrome / genetics*

Substances

  • DNA-Binding Proteins
  • TNIP1 protein, human

Grants and funding

This work was supported by Natural Science Foundation Major International (Regional) Joint Research (81320108009), Key Project of Natural Science Foundation (81130019), National Natural Science Foundation Project (31370893), Chongqing Key Laboratory of Ophthalmology (CSTC, 2008CA5003), Clinic Key Project of Ministry of Health, Basic Research program of Chongqing (cstc2013jcyjC10001), and Fund for PAR-EU Scholars Program. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.