DDX6 regulates sequestered nuclear CUG-expanded DMPK-mRNA in dystrophia myotonica type 1

Nucleic Acids Res. 2014 Jun;42(11):7186-200. doi: 10.1093/nar/gku352. Epub 2014 May 3.

Abstract

Myotonic dystrophy type 1 (DM1) is caused by CUG triplet expansions in the 3' UTR of dystrophia myotonica protein kinase (DMPK) messenger ribonucleic acid (mRNA). The etiology of this multi-systemic disease involves pre-mRNA splicing defects elicited by the ability of the CUG-expanded mRNA to 'sponge' splicing factors of the muscleblind family. Although nuclear aggregation of CUG-containing mRNPs in distinct foci is a hallmark of DM1, the mechanisms of their homeostasis have not been completely elucidated. Here we show that a DEAD-box helicase, DDX6, interacts with CUG triplet-repeat mRNA in primary fibroblasts from DM1 patients and with CUG-RNA in vitro. DDX6 overexpression relieves DM1 mis-splicing, and causes a significant reduction in nuclear DMPK-mRNA foci. Conversely, knockdown of endogenous DDX6 leads to a significant increase in DMPK-mRNA foci count and to increased sequestration of MBNL1 in the nucleus. While the level of CUG-expanded mRNA is unaffected by increased DDX6 expression, the mRNA re-localizes to the cytoplasm and its interaction partner MBNL1 becomes dispersed and also partially re-localized to the cytoplasm. Finally, we show that DDX6 unwinds CUG-repeat duplexes in vitro in an adenosinetriphosphate-dependent manner, suggesting that DDX6 can remodel and release nuclear DMPK messenger ribonucleoprotein foci, leading to normalization of pathogenic alternative splicing events.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • 3' Untranslated Regions*
  • Cell Nucleus / chemistry
  • Cells, Cultured
  • Cytoplasm / chemistry
  • DEAD-box RNA Helicases / antagonists & inhibitors
  • DEAD-box RNA Helicases / metabolism*
  • Fibroblasts / chemistry
  • Fibroblasts / metabolism
  • Humans
  • Myotonic Dystrophy / enzymology
  • Myotonic Dystrophy / genetics*
  • Myotonic Dystrophy / metabolism
  • Myotonin-Protein Kinase
  • Protein Serine-Threonine Kinases / genetics*
  • Protein Serine-Threonine Kinases / metabolism
  • Proto-Oncogene Proteins / antagonists & inhibitors
  • Proto-Oncogene Proteins / metabolism*
  • RNA Splicing
  • RNA, Messenger / analysis
  • RNA, Messenger / chemistry
  • RNA, Messenger / metabolism
  • RNA-Binding Proteins / analysis
  • Receptor, Insulin / genetics
  • Receptor, Insulin / metabolism
  • Repetitive Sequences, Nucleic Acid
  • Trinucleotide Repeat Expansion

Substances

  • 3' Untranslated Regions
  • DMPK protein, human
  • MBNL1 protein, human
  • Proto-Oncogene Proteins
  • RNA, Messenger
  • RNA-Binding Proteins
  • Receptor, Insulin
  • Myotonin-Protein Kinase
  • Protein Serine-Threonine Kinases
  • DDX6 protein, human
  • DEAD-box RNA Helicases