Homozygous deletion of six genes including corneodesmosin on chromosome 6p21.3 is associated with generalized peeling skin disease

J Dermatol Sci. 2014 Jul;75(1):36-42. doi: 10.1016/j.jdermsci.2014.04.003. Epub 2014 Apr 15.

Abstract

Background: Peeling skin syndrome (PSS) is a rare autosomal recessive form of ichthyosis showing skin exfoliation. PSS is divided into acral and generalized PSS, and the latter is further classified into non-inflammatory type (PSS type A) and inflammatory type (PSS type B). PSS type B is now called peeling skin disease (PSD). Different loss-of-function mutations in the corneodesmosin (CDSN) gene have been reported to cause PSD.

Objective: The aim of this study was to determine genetic basis of disease in a 14-year-old Japanese patient with PSD.

Methods and results: Immunohistochemical study showed lack of corneodesmosin (CDSN) in the skin, and standard PCR for genomic DNA failed to amplify CDSN product, suggesting CDSN defect. Multiplex ligation-dependent probe amplification and genomic quantitative real-time PCR analyses detected large homozygous deletion of 59,184bp extending from 40.6kb upstream to 13.2kb downstream of CDSN, which included 6 genes (TCF19, CCHCR1, PSORS1C2, PSORS1C1, CDSN and C6orf15). The continuous gene lost did not result in additional clinical features. Inverted repeats with 85% similarity flanking the deletion breakpoint were considered to mediate the deletion by non-homologous end joining or fork stalling and template switching/microhomology-mediated break-induced replication. Parents were clinically unaffected and were heterozygote carriers of the same deletion, which was absent in 284 ethnically matched control alleles. We also developed simple PCR method, which is useful for detection of this deletion.

Conclusion: Although 5 other genes were also deleted, homozygous deletion of CDSN was considered to be responsible for this PSD.

Keywords: CDSN; Gene deletion; MLPA; Peeling skin syndrome; qPCR.

Publication types

  • Case Reports
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adolescent
  • Biopsy
  • Chromosomes, Human, Pair 6*
  • Dermatitis, Exfoliative / diagnosis
  • Dermatitis, Exfoliative / genetics*
  • Dermatitis, Exfoliative / metabolism
  • Gene Deletion*
  • Genetic Predisposition to Disease
  • Genetic Testing / methods
  • Glycoproteins / analysis
  • Glycoproteins / genetics*
  • Homozygote*
  • Humans
  • Immunohistochemistry
  • Intercellular Signaling Peptides and Proteins
  • Male
  • Phenotype
  • Polymerase Chain Reaction
  • Skin / chemistry
  • Skin / pathology
  • Skin Diseases, Genetic / diagnosis
  • Skin Diseases, Genetic / genetics*
  • Skin Diseases, Genetic / metabolism

Substances

  • CDSN protein, human
  • Glycoproteins
  • Intercellular Signaling Peptides and Proteins

Supplementary concepts

  • Peeling Skin Syndrome