Icb-1 gene polymorphism rs1467465 is associated with susceptibility to ovarian cancer

J Ovarian Res. 2014 Apr 23:7:42. doi: 10.1186/1757-2215-7-42. eCollection 2014.

Abstract

In this study, we tested the hypothesis that single nucleotide polymorphisms (SNPs) of differentiation-associated human gene icb-1 (C1orf38) may be associated with ovarian cancer susceptibility. For this purpose, we compared the genotype and allele frequencies of the SNPs rs1467465 and rs12048235 in a group of 184 ovarian cancer patients with a control group of 184 age- and gender-matched women without any malignancy. Genotype-phenotype association revealed that A allele of SNP rs1467465 was more frequent in ovarian cancer patients than in the control group (0.40 vs. 0.33, OR 1.37, 95% CI 1.013-1.853, p = 0.04). After analysis of allele positivity we observed that A-positive genotypes were more frequent in the ovarian cancer group (0.65 vs. 0.53, OR 1.63, 95% CI 1.072-2.483, p = 0.02). Furthermore, the heterozygous genotype of rs1467465 was found to be more frequent in the patients group (0.50 vs. 0.41, OR 1.63, 95% CI 1.045-2.045, p = 0.03). No significant results were obtained with regard to SNP rs1204823. Our data suggest, that SNP rs1467465 of human gene icb-1 might affect susceptibility to ovarian cancer.

Keywords: Case control study; Ovarian cancer; Single nucleotide polymorphism; icb-1 gene.

MeSH terms

  • Case-Control Studies
  • Female
  • Gene Frequency
  • Genetic Association Studies
  • Genetic Predisposition to Disease
  • Humans
  • Intracellular Signaling Peptides and Proteins / genetics*
  • Middle Aged
  • Neoplasm Proteins / genetics*
  • Neoplasms, Cystic, Mucinous, and Serous / genetics*
  • Ovarian Neoplasms / genetics*
  • Polymorphism, Single Nucleotide*
  • Risk Factors
  • Sequence Analysis, DNA

Substances

  • Intracellular Signaling Peptides and Proteins
  • Neoplasm Proteins
  • THEMIS2 protein, human