Detection of RAS mutation by pyrosequencing in thyroid cytology samples

Int J Surg. 2014:12 Suppl 1:S91-4. doi: 10.1016/j.ijsu.2014.05.045. Epub 2014 May 24.

Abstract

Introduction: Fine-needle aspiration cytology (FNAC) is the primary means to distinguish benign from malignant thyroid nodules. However, adjunctive diagnostic tests are needed as 20-40% of FNAC are inconclusive. RAS mutations have been described in differentiated thyroid cancer and they could be used as tumor markers. However, their prevalence varies widely among studies, probably as a result of the detection methods used. We investigated whether the pyrosequencing method can be applied to detect NRAS and KRAS mutations in thyroid aspirates.

Patients and methods: A total of 37 thyroid aspirates, including benign hyperplastic nodules (HBN, N = 16) and follicular thyroid carcinomas (FTC, N = 21) were analyzed for the presence of NRAS(61) and KRAS(13) mutations.

Results: A RAS mutation was found in 31% and 62% of BN and FTC respectively. Most samples displayed a percentage of mutated alleles lower than 50% (median = 30.8% and 15.3% in FTC and HBN respectively), a result compatible with the presence of extra-nodular cells contaminating the FNA or with the subclonal nature of both types of thyroid nodules.

Discussion: Pyrosequencing is a reliable assay to detect RAS mutations in fine-needle thyroid aspirates.

Conclusions: The low specificity and sensitivity limit the power of this test to distinguish between FTC and benign nodules in inconclusive FNACs.

Keywords: FNAC; RAS; Thyroid carcinoma.

Publication types

  • Evaluation Study

MeSH terms

  • Adenocarcinoma, Follicular / genetics*
  • Adenocarcinoma, Follicular / pathology
  • Adult
  • Biomarkers, Tumor / genetics*
  • Biopsy, Fine-Needle
  • Female
  • GTP Phosphohydrolases / genetics*
  • Humans
  • Male
  • Membrane Proteins / genetics*
  • Middle Aged
  • Mutation*
  • Proto-Oncogene Proteins / genetics*
  • Proto-Oncogene Proteins p21(ras)
  • Retrospective Studies
  • Sensitivity and Specificity
  • Sequence Analysis, DNA / methods*
  • Thyroid Neoplasms / genetics*
  • Thyroid Neoplasms / pathology
  • Thyroid Nodule / genetics
  • Thyroid Nodule / pathology
  • ras Proteins / genetics*

Substances

  • Biomarkers, Tumor
  • KRAS protein, human
  • Membrane Proteins
  • Proto-Oncogene Proteins
  • GTP Phosphohydrolases
  • NRAS protein, human
  • Proto-Oncogene Proteins p21(ras)
  • ras Proteins