High frequency of BTG1 deletions in patients with BCR-ABL1-positive acute leukemia

Cancer Genet. 2014 May;207(5):226-30. doi: 10.1016/j.cancergen.2014.05.003. Epub 2014 May 16.

Abstract

Deletions affecting the B-cell translocation gene 1 (BTG1) have recently been reported in 9% of patients with B-cell precursor acute lymphoblastic leukemia (BCP-ALL), and occur even more frequently in ETV6-RUNX1-positive and BCR-ABL1-positive subgroups. To investigate whether the BTG1 deletions occur in other BCR-ABL1-positive acute leukemias besides BCP-ALL, we analyzed 44 leukemia cases harboring the BCR-ABL1 transcript [32 BCP-ALL, six mixed-phenotype acute leukemia (MPAL), and six chronic myeloid leukemia in B-lineage blast crisis (CML-BC)] by array-based comparative genomic hybridization and reverse transcription-PCR. BTG1 deletions were present in 31.8% of BCR-ABL1-positive acute leukemia patients, including 31.3% of BCP-ALL (10/32), 33.3% of MPAL (2/6), and 33.3% of CML-BC (B-lineage) (2/6) patients. Of note, the intragenic deletion breakpoints, mapping to 5 different positions at the proximal end of the breakpoint, clustered tightly within exon 2 of BTG1, which were located within a stretch of 20 bp from nucleotide 284 to nucleotide 304 and led to truncated BTG1 transcripts. There were no significant differences in the median white blood cell count, hemoglobin concentration, platelet count, bone marrow blast count, sex, age, or overall complete remission rate between patients with and without BTG1 deletions. Taken together, our data suggest that BTG1 deletions might play a role in leukemogenesis of BCP-ALL as well as of BCR-ABL1-positive MPAL and CML-BC (B-lineage).

Keywords: B-cell precursor acute lymphoblastic leukemia; BTG1; array-based comparative genomic hybridization; chronic myeloid leukemia in B-lineage blast crisis; mixed-phenotype acute leukemia.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adolescent
  • Adult
  • Aged
  • Aged, 80 and over
  • Bone Marrow Cells
  • Cell Transformation, Neoplastic / genetics
  • Child
  • Core Binding Factor Alpha 2 Subunit / genetics*
  • Female
  • Fusion Proteins, bcr-abl / genetics*
  • Gene Deletion
  • Hemoglobins / analysis
  • Humans
  • Leukemia, Myelogenous, Chronic, BCR-ABL Positive / genetics*
  • Leukocyte Count
  • Male
  • Middle Aged
  • Neoplasm Proteins / genetics*
  • Oncogene Proteins, Fusion / genetics*
  • Platelet Count
  • Precursor B-Cell Lymphoblastic Leukemia-Lymphoma / genetics*
  • Prognosis
  • Young Adult

Substances

  • BCR-ABL1 fusion protein, human
  • Core Binding Factor Alpha 2 Subunit
  • Hemoglobins
  • Neoplasm Proteins
  • Oncogene Proteins, Fusion
  • TEL-AML1 fusion protein
  • BTG1 protein, human
  • Fusion Proteins, bcr-abl