Human APOBEC3F incorporation into human immunodeficiency virus type 1 particles

Virus Res. 2014 Oct 13:191:30-8. doi: 10.1016/j.virusres.2014.07.011. Epub 2014 Jul 16.

Abstract

APOBEC3 proteins are a family of cytidine deaminases that exhibit broad antiretroviral activity. Among APOBEC3 proteins, APOBEC3G (hA3G) and APOBEC3F (hA3F) exhibit the most potent anti-HIV-1 activities. Although the incorporation of hA3F into virions is a prerequisite for exerting its antiviral function, the detail mechanism underlying remains incompletely understood. In this work, we present data showing that the nucleocapsid (NC) domain of HIV-1 Gag and a linker sequence between the two cytidine deaminase domains within hA3F, i.e., 104-156 amino acids, are required for viral packaging of hA3F. A detailed mapping study reveals that the cluster of basic residues surrounding the N-terminal zinc finger (ZF) and the linker region between the ZFs of HIV-1 NC play an important role in A3F incorporation, in addition, at least one of two ZFs is required. A hA3F fragment is able to compete with both hA3G and hA3F for viral incorporation, suggesting a common mechanism underlying virion encapsidation of hA3G and hA3F. Taken together, these results shed a light on the detail mechanism underlying viral incorporation of hA3F.

Keywords: APOBEC3F; APOBEC3G; HIV-1; Incorporation; NC.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Cytosine Deaminase / chemistry
  • Cytosine Deaminase / genetics
  • Cytosine Deaminase / metabolism*
  • HIV Infections / enzymology*
  • HIV Infections / virology
  • HIV-1 / chemistry
  • HIV-1 / genetics
  • HIV-1 / physiology*
  • Humans
  • Virion / genetics
  • Virion / physiology
  • Virus Assembly*
  • Zinc Fingers
  • gag Gene Products, Human Immunodeficiency Virus / chemistry
  • gag Gene Products, Human Immunodeficiency Virus / genetics
  • gag Gene Products, Human Immunodeficiency Virus / metabolism

Substances

  • gag Gene Products, Human Immunodeficiency Virus
  • APOBEC3F protein, human
  • Cytosine Deaminase