Engineered hyperactive integrase for concerted HIV-1 DNA integration

PLoS One. 2014 Aug 13;9(8):e105078. doi: 10.1371/journal.pone.0105078. eCollection 2014.

Abstract

The DNA cutting and joining reactions of HIV-1 integration are catalyzed by integrase (IN), a viral protein that functions as a tetramer bridging the two viral DNA ends (intasome). Two major obstacles for biochemical and structural studies of HIV-1 intasomes are 1) the low efficiency of assembly with oligonucleotide DNA substrates, and 2) the non-specific aggregation of both intasomes and free IN in the reaction mixture. By fusing IN with a small non-specific DNA binding protein, Sulfolobus solfataricus chromosomal protein Sso7d (PDB: 1BNZ), we have engineered a highly soluble and hyperactive IN. Unlike wild-type IN, it efficiently catalyzes intasome assembly and concerted integration with oligonucleotide DNA substrates. The fusion IN protein also functions to integrate viral reverse transcripts during HIV-infection. The hyperactive HIV-1 IN may assist in facilitating future biochemical and structural studies of HIV-1 intasomes. Understanding the mechanistic basis of the Sso7d-IN fusion protein could provide insight into the factors that have hindered biophysical studies of wild-type HIV-1 IN and intasomes.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, N.I.H., Intramural

MeSH terms

  • Archaeal Proteins / genetics*
  • Archaeal Proteins / metabolism
  • Base Sequence
  • DNA, Viral / genetics
  • DNA, Viral / metabolism
  • DNA-Binding Proteins / genetics*
  • DNA-Binding Proteins / metabolism
  • HIV Infections / genetics
  • HIV Infections / metabolism
  • HIV Infections / virology
  • HIV Integrase / genetics*
  • HIV Integrase / metabolism
  • HIV-1 / genetics*
  • HIV-1 / physiology
  • Humans
  • Protein Engineering*
  • Recombinant Fusion Proteins / genetics
  • Recombinant Fusion Proteins / metabolism
  • Sulfolobus solfataricus / genetics*
  • Sulfolobus solfataricus / metabolism
  • Virus Integration*

Substances

  • Archaeal Proteins
  • DNA, Viral
  • DNA-Binding Proteins
  • Recombinant Fusion Proteins
  • Sso7d protein, Sulfolobus
  • HIV Integrase
  • p31 integrase protein, Human immunodeficiency virus 1