Sequential and ordered assembly of a large DNA repair complex on undamaged chromatin

J Cell Biol. 2014 Sep 1;206(5):589-98. doi: 10.1083/jcb.201403096. Epub 2014 Aug 25.

Abstract

In nucleotide excision repair (NER), damage recognition by XPC-hHR23b is described as a critical step in the formation of the preincision complex (PInC) further composed of TFIIH, XPA, RPA, XPG, and ERCC1-XPF. To obtain new molecular insights into the assembly of the PInC, we analyzed its formation independently of DNA damage by using the lactose operator/repressor reporter system. We observed a sequential and ordered self-assembly of the PInC operating upon immobilization of individual NER factors on undamaged chromatin and mimicking that functioning on a bona fide NER substrate. We also revealed that the recruitment of the TFIIH subunit TTDA, involved in trichothiodystrophy group A disorder (TTD-A), was key in the completion of the PInC. TTDA recruits XPA through its first 15 amino acids, depleted in some TTD-A patients. More generally, these results show that proteins forming large nuclear complexes can be recruited sequentially on chromatin in the absence of their natural DNA target and with no reciprocity in their recruitment.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Cell Line, Tumor
  • Chromatin / metabolism*
  • DNA Damage
  • DNA Repair
  • DNA Repair Enzymes / metabolism
  • DNA-Binding Proteins / chemistry
  • DNA-Binding Proteins / metabolism
  • Endonucleases / metabolism
  • Humans
  • Immobilized Proteins / chemistry
  • Immobilized Proteins / metabolism
  • Nuclear Proteins / metabolism
  • Protein Interaction Domains and Motifs
  • Protein Multimerization
  • Protein Transport
  • Transcription Factor TFIIH / metabolism
  • Transcription Factors / metabolism
  • Xeroderma Pigmentosum Group A Protein / chemistry
  • Xeroderma Pigmentosum Group A Protein / metabolism

Substances

  • Chromatin
  • DDB2 protein, human
  • DNA excision repair protein ERCC-5
  • DNA-Binding Proteins
  • GTF2H5 protein, human
  • Immobilized Proteins
  • Nuclear Proteins
  • RAD23B protein, human
  • Transcription Factors
  • XPA protein, human
  • Xeroderma Pigmentosum Group A Protein
  • Transcription Factor TFIIH
  • XPC protein, human
  • Endonucleases
  • DNA Repair Enzymes