Altered glutamate protein co-expression network topology linked to spine loss in the auditory cortex of schizophrenia

Biol Psychiatry. 2015 Jun 1;77(11):959-68. doi: 10.1016/j.biopsych.2014.09.006. Epub 2014 Nov 26.

Abstract

Background: Impaired glutamatergic signaling is believed to underlie auditory cortex pyramidal neuron dendritic spine loss and auditory symptoms in schizophrenia. Many schizophrenia risk loci converge on the synaptic glutamate signaling network. We therefore hypothesized that alterations in glutamate signaling protein expression and co-expression network features are present in schizophrenia.

Methods: Gray matter homogenates were prepared from auditory cortex gray matter of 22 schizophrenia and 23 matched control subjects, a subset of whom had been previously assessed for dendritic spine density. One hundred fifty-five selected synaptic proteins were quantified by targeted mass spectrometry. Protein co-expression networks were constructed using weighted gene co-expression network analysis.

Results: Proteins with evidence for altered expression in schizophrenia were significantly enriched for glutamate signaling pathway proteins (GRIA4, GRIA3, ATP1A3, and GNAQ). Synaptic protein co-expression was significantly decreased in schizophrenia with the exception of a small group of postsynaptic density proteins, whose co-expression increased and inversely correlated with spine density in schizophrenia subjects.

Conclusions: We observed alterations in the expression of glutamate signaling pathway proteins. Among these, the novel observation of reduced ATP1A3 expression is supported by strong genetic evidence indicating it may contribute to psychosis and cognitive impairment phenotypes. The observations of altered protein network topology further highlight the complexity of glutamate signaling network pathology in schizophrenia and provide a framework for evaluating future experiments to model the contribution of genetic risk to disease pathology.

Keywords: Auditory cortex; Glutamate; Postmortem; Proteomics; Schizophrenia; Spine.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Adult
  • Aged
  • Analysis of Variance
  • Animals
  • Antipsychotic Agents / pharmacology
  • Auditory Cortex / drug effects
  • Auditory Cortex / metabolism
  • Auditory Cortex / ultrastructure*
  • Case-Control Studies
  • Dendritic Spines / drug effects
  • Dendritic Spines / metabolism*
  • Dendritic Spines / pathology
  • Female
  • GTP-Binding Protein alpha Subunits / metabolism
  • GTP-Binding Protein alpha Subunits, Gq-G11
  • Gene Expression Regulation / drug effects
  • Gene Expression Regulation / physiology*
  • Glutamic Acid / metabolism*
  • Humans
  • Macaca mulatta
  • Male
  • Middle Aged
  • Postmortem Changes
  • Protein Interaction Maps / drug effects
  • Schizophrenia / pathology*
  • Signal Transduction / drug effects
  • Signal Transduction / physiology*
  • Sodium-Potassium-Exchanging ATPase / metabolism
  • Young Adult

Substances

  • ATP1A3 protein, human
  • Antipsychotic Agents
  • GNAQ protein, human
  • GTP-Binding Protein alpha Subunits
  • Glutamic Acid
  • GTP-Binding Protein alpha Subunits, Gq-G11
  • Sodium-Potassium-Exchanging ATPase