Association between FTO, MC4R, SLC30A8, and KCNQ1 gene variants and type 2 diabetes in Saudi population

Genet Mol Res. 2014 Dec 4;13(4):10194-203. doi: 10.4238/2014.December.4.14.

Abstract

Recent genome wide association studies identified many loci in several genes that have been consistently associated with type 2 diabetes mellitus in various ethnic populations. Among the genes that were most strongly associated with diabetes were fat mass- and obesity-associated, melanocortin 4 receptor, solute carrier family 30 member 8 (SLC30A8), and a member of the potassium voltage-gated channels. In the present study, we examined the association between variants in fat mass- and obesity-associated [rs9939609 (A/T)], melanocortin 4 receptor [rs17782313 (C/T), and rs12970134 (A/G)], SLC30A8 [rs13266634 (C/T)], and a member of the potassium voltage-gated channels [rs2237892(C/T)] genes in diabetes patients from Saudi Arabia. Genotypes were determined using the TaqMan single-nucleotide polymorphism genotype analysis technique. Minor allele frequency of the 4 variants tested was comparable between type 2 diabetes cases and controls. We observed an association between allele variants of SLC30A8 [rs13266634 (C/T)] and type 2-diabetes (P = 0.04). The other single-nucleotide polymorphisms examined in this study showed moderate or no correlation with diabetes in Saudis. Our data indicate that the SLC30A8 polymorphisms are associated with type 2 diabetes in the Saudi population. There is no evidence supporting an association between variants in the fat mass- and obesity-associated and melanocortin 4 receptor, and a member of the potassium voltage-gated channels genes and type 2 diabetes in the Saudi population.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adult
  • Alpha-Ketoglutarate-Dependent Dioxygenase FTO
  • Case-Control Studies
  • Cation Transport Proteins / genetics*
  • Diabetes Mellitus, Type 2 / genetics*
  • Female
  • Genetic Association Studies
  • Genetic Predisposition to Disease
  • Genotype
  • Humans
  • KCNQ1 Potassium Channel / genetics*
  • Male
  • Middle Aged
  • Polymorphism, Single Nucleotide*
  • Proteins / genetics*
  • Receptor, Melanocortin, Type 4 / genetics*
  • Saudi Arabia
  • Zinc Transporter 8

Substances

  • Cation Transport Proteins
  • KCNQ1 Potassium Channel
  • KCNQ1 protein, human
  • MC4R protein, human
  • Proteins
  • Receptor, Melanocortin, Type 4
  • SLC30A8 protein, human
  • Zinc Transporter 8
  • Alpha-Ketoglutarate-Dependent Dioxygenase FTO
  • FTO protein, human