JAK2 exon 14 skipping in patients with primary myelofibrosis: a minor splice variant modulated by the JAK2-V617F allele burden

PLoS One. 2015 Jan 24;10(1):e0116636. doi: 10.1371/journal.pone.0116636. eCollection 2015.

Abstract

Background: Primary myelofibrosis (PMF) is an acquired clonal disease of the hematopoietic stem cell compartment, characterized by bone marrow fibrosis, anemia, splenomegaly and extramedullary hematopoiesis. About 60% of patients with PMF harbor a somatic mutation of the JAK2 gene (JAK2-V617F) in their hematopoietic lineage. Recently, a splicing isoform of JAK2, lacking exon 14 (JAK2Δ14) was described in patients affected by myeloproliferative diseases.

Materials and methods: By using a specific RT-qPCR method, we measured the ratio between the splicing isoform and the JAK2 full-length transcript (JAK2+14) in granulocytes, isolated from peripheral blood, of forty-four patients with PMF and nine healthy donors.

Results: We found that JAK2Δ14 was only slightly increased in patients and, at variance with published data, the splicing isoform was also detectable in healthy controls. We also found that, in patients bearing the JAK2-V617F mutation, the percentage of mutated alleles correlated with the observed increase in JAK2Δ14. Homozygosity for the mutation was also associated with a higher level of JAK2+14. Bioinformatic analysis indicates the possibility that the G>T transversion may interfere with the correct splicing of exon 14 by modifying a splicing regulatory sequence.

Conclusions: Increased levels of JAK2 full-length transcript and a small but significant increase in JAK2 exon 14 skipping, are associated with the JAK2-V617F allele burden in PMF granulocytes. Our data do not confirm a previous claim that the production of the JAK2Δ14 isoform is related to the pathogenesis of PMF.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Cell Line
  • Computational Biology
  • Exons
  • Gene Expression Profiling
  • Humans
  • Janus Kinase 2 / chemistry
  • Janus Kinase 2 / genetics*
  • Mutation
  • Primary Myelofibrosis / genetics*
  • RNA Splicing*
  • Regression Analysis
  • Sequence Deletion

Substances

  • JAK2 protein, human
  • Janus Kinase 2

Grants and funding

This work was supported by a grant from Associazione Italiana per la Ricerca sul Cancro (AIRC, Milano), Special Program Molecular Clinical Oncology “5x1000” to the AGIMM (AIRC-Gruppo Italiano Malattie Mieloproliferative) project number #1005. A detailed description of the AGIMM project is available at http://www.progettoagimm.it. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.