Cloning and characterization of the human integrin β6 gene promoter

PLoS One. 2015 Mar 27;10(3):e0121439. doi: 10.1371/journal.pone.0121439. eCollection 2015.

Abstract

The integrin β6 (ITGB6) gene, which encodes the limiting subunit of the integrin αvβ6 heterodimer, plays an important role in wound healing and carcinogenesis. The mechanism underlying ITGB6 regulation, including the identification of DNA elements and cognate transcription factors responsible for basic transcription of human ITGB6 gene, remains unknown. This report describes the cloning and characterization of the human ITGB6 promoter. Using 5'-RACE (rapid amplification of cDNA ends) analysis, the transcriptional initiation site was identified. Promoter deletion analysis identified and functionally validated a TATA box located in the region -24 to -18 base pairs upstream of the ITGB6 promoter. The regulatory elements for transcription of the ITGB6 gene were predominantly located -289 to -150 from the ITGB6 promoter and contained putative binding sites for transcription factors such as STAT3 and C/EBPα. Using chromatin immunoprecipitation assays, this study has demonstrated, for the first time, that transcription factors STAT3 and C/EBPα are involved in the positive regulation of ITGB6 transcription in oral squamous cell carcinoma cells. These findings have important implications for unraveling the mechanism of abnormal ITGB6 activation in tissue remodeling and tumorigenesis.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Binding Sites
  • CCAAT-Enhancer-Binding Proteins / metabolism
  • Carcinoma, Squamous Cell / metabolism*
  • Cell Line, Tumor
  • Cloning, Molecular / methods*
  • Gene Expression Regulation, Neoplastic
  • HEK293 Cells
  • Humans
  • Integrin beta Chains / chemistry
  • Integrin beta Chains / genetics*
  • Integrin beta Chains / metabolism*
  • Mouth Neoplasms / metabolism*
  • Promoter Regions, Genetic*
  • STAT3 Transcription Factor / metabolism
  • TATA Box
  • Transcription Initiation Site

Substances

  • CCAAT-Enhancer-Binding Proteins
  • CEBPA protein, human
  • Integrin beta Chains
  • STAT3 Transcription Factor
  • STAT3 protein, human

Grants and funding

This work was supported by the National Natural Sciences Foundation of China (81072208 to MX, 30900661 and 81370160 to XD) and Medical Innovation Project of Fujian Province (2014CXB-47 to MX). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.