Molecular spectrum of BRAF, NRAS and KRAS gene mutations in plasma cell dyscrasias: implication for MEK-ERK pathway activation

Oncotarget. 2015 Sep 15;6(27):24205-17. doi: 10.18632/oncotarget.4434.

Abstract

Multiple myeloma (MM) is a clinically and genetically heterogeneous plasma cell (PC) malignancy. Whole-exome sequencing has identified therapeutically targetable mutations such as those in the mitogen-activated protein kinase (MAPK) pathway, which are the most prevalent MM mutations. We used deep sequencing to screen 167 representative patients with PC dyscrasias [132 with MM, 24 with primary PC leukemia (pPCL) and 11 with secondary PC leukemia (sPCL)] for mutations in BRAF, NRAS and KRAS, which were respectively found in 12%, 23.9% and 29.3% of cases. Overall, the MAPK pathway was affected in 57.5% of the patients (63.6% of those with sPCL, 59.8% of those with MM, and 41.7% of those with pPCL). The majority of BRAF variants were comparably expressed at transcript level. Additionally, gene expression profiling indicated the MAPK pathway is activated in mutated patients. Finally, we found that vemurafenib inhibition of BRAF activation in mutated U266 cells affected the expression of genes known to be associated with MM. Our data confirm and extend previous published evidence that MAPK pathway activation is recurrent in myeloma; the finding that it is mediated by BRAF mutations in a significant fraction of patients has potentially immediate clinical implications.

Keywords: BRAF; RAS; multiple myeloma; next generation sequencing; plasma cell leukemia.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adult
  • Aged
  • Aged, 80 and over
  • Apoptosis
  • Cell Line, Tumor
  • Exome
  • Extracellular Signal-Regulated MAP Kinases / metabolism
  • Female
  • GTP Phosphohydrolases / genetics*
  • Gene Expression Profiling
  • Gene Expression Regulation, Leukemic
  • Gene Expression Regulation, Neoplastic
  • Humans
  • Indoles / therapeutic use
  • Leukemia / genetics
  • Leukemia / metabolism
  • MAP Kinase Kinase 1 / metabolism
  • MAP Kinase Signaling System*
  • Male
  • Membrane Proteins / genetics*
  • Middle Aged
  • Multiple Myeloma / genetics
  • Multiple Myeloma / metabolism
  • Mutation*
  • Paraproteinemias / genetics*
  • Paraproteinemias / metabolism
  • Principal Component Analysis
  • Proto-Oncogene Proteins B-raf / genetics*
  • Proto-Oncogene Proteins p21(ras) / genetics*
  • Sulfonamides / therapeutic use
  • Vemurafenib

Substances

  • Indoles
  • KRAS protein, human
  • Membrane Proteins
  • Sulfonamides
  • Vemurafenib
  • BRAF protein, human
  • Proto-Oncogene Proteins B-raf
  • Extracellular Signal-Regulated MAP Kinases
  • MAP Kinase Kinase 1
  • MAP2K1 protein, human
  • GTP Phosphohydrolases
  • NRAS protein, human
  • Proto-Oncogene Proteins p21(ras)