Development of a flow cytometric method to detect the presence of mutated nucleophosmin 1 in acute myeloid leukemia

Hematol Oncol Stem Cell Ther. 2015 Sep;8(3):106-14. doi: 10.1016/j.hemonc.2015.06.009. Epub 2015 Jul 9.

Abstract

Objective/background: Nucleophosmin 1 (NPM1) plays multiple roles in cell growth and proliferation. Deletion/insertion mutations in exon 12 of NPM1 (NPM1-DIM), commonly found in patients with acute myeloid leukemia (AML), alter the C-terminal amino acids and disrupt the normal nucleocytoplasmic shuttling function of the protein, which in turn leads to disease pathogenesis. However, this altered function as a result of NPM1-DIM positivity is actually associated with a significantly better response to therapy and overall survival, and thus it is of clinical relevance to investigate the mutation status at diagnosis. Our objective was to design a reliable flow cytometry assay to detect mutated NPM1 in peripheral blood (PB) samples from AML patients, using a polyclonal mutation-specific antibody.

Methods: A commercially available NPM1 mutation-specific polyclonal antibody in combination with a secondary goat antirabbit antibody was used to detect the C-terminal-mutated NPM1 by flow cytometry. OCI/AML3 (+) cell line and clinical PB controls were used to optimize the assay and determine sensitivity, reliability, and reproducibility parameters. The assay was then tested on a small cohort of 12 AML patients at diagnosis and compared with NPM1-DIM testing on a standard polymerase chain reaction (PCR) platform.

Results: Flow cytometry using the polyclonal antibody was able to reliably detect mutated NPM1 populations of at least 10%. Using an objective analysis of the mean fluorescent intensity, clear positive and negative mutated cell populations could be distinguished using the clinical AML samples. From the analysis of 12 patients, 2 were found to be positive using this assay, which corresponded with conventional PCR methodology.

Conclusions: Flow cytometry may be used to detect NPM1 C-terminal mutations in AML patients using a polyclonal anti-NPM1 antibody, allowing rapid mutation status determination at diagnosis.

Keywords: Acute myeloid leukemia; Flow cytometry; Nucleophosmin 1.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adolescent
  • Adult
  • Aged
  • Antibodies / chemistry
  • Cohort Studies
  • DNA Mutational Analysis
  • Exons
  • Female
  • Flow Cytometry / methods*
  • Humans
  • Leukemia, Myeloid, Acute / blood*
  • Leukemia, Myeloid, Acute / genetics*
  • Leukocyte Common Antigens / genetics
  • Male
  • Middle Aged
  • Mutation*
  • Nuclear Proteins / genetics*
  • Nucleophosmin
  • Polymerase Chain Reaction
  • Protein Structure, Tertiary
  • Reproducibility of Results
  • Young Adult

Substances

  • Antibodies
  • NPM1 protein, human
  • Nuclear Proteins
  • Nucleophosmin
  • Leukocyte Common Antigens
  • PTPRC protein, human