The Structure of YnaI Implies Structural and Mechanistic Conservation in the MscS Family of Mechanosensitive Channels

Structure. 2015 Sep 1;23(9):1705-1714. doi: 10.1016/j.str.2015.06.023. Epub 2015 Aug 6.

Abstract

Mechanosensitive channels protect bacteria against lysis caused by a sudden drop in osmolarity in their surroundings. Besides the channel of large conductance (MscL) and small conductance (MscS), Escherichia coli has five additional paralogs of MscS that are functional and widespread in the bacterial kingdom. Here, we present the structure of YnaI by cryo-electron microscopy to a resolution of 13 Å. While the cytosolic vestibule is structurally similar to that in MscS, additional density is seen in the transmembrane (TM) region consistent with the presence of two additional TM helices predicted for YnaI. The location of this density suggests that the extra TM helices are tilted, which could induce local membrane curvature extending the tension-sensing paddles seen in MscS. Off-center lipid-accessible cavities are seen that resemble gaps between the sensor paddles in MscS. The conservation of the tapered shape and the cavities in YnaI suggest a mechanism similar to that of MscS.

Keywords: bacteria; cryo-electron microscopy; fluorescence; osmotic stress; protein-lipid interaction.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Cryoelectron Microscopy
  • Cytosol / metabolism
  • Escherichia coli / chemistry
  • Escherichia coli / metabolism*
  • Escherichia coli Proteins / chemistry*
  • Escherichia coli Proteins / metabolism
  • Ion Channels / chemistry*
  • Ion Channels / metabolism
  • Membrane Lipids / metabolism
  • Models, Molecular
  • Protein Structure, Secondary
  • Tryptophan / metabolism

Substances

  • Escherichia coli Proteins
  • Ion Channels
  • Membrane Lipids
  • MscS protein, E coli
  • YnaI protein, E coli
  • Tryptophan