Comprehensive portrait of recurrent glioblastoma multiforme in molecular and clinical characteristics

Oncotarget. 2015 Oct 13;6(31):30968-74. doi: 10.18632/oncotarget.5038.

Abstract

Glioblastoma multiforme is the most common primary malignant brain tumor in adults. In addition to poor response to treatment, a high recurrence rate contributes to the poor prognosis. The purpose of this study was to investigate the genetical and clinical characteristics of recurrent glioblastoma. We used whole transcriptome sequencing data to examine the distribution of molecular subtypes and gene signatures in 22 recurrent glioblastoma taken from the Chinese population, and further analyzed biological progression of the tumors, when compared with primary glioblastoma. The proportion of the classical subtype in recurrent ones (22%) was lower than that in primary glioblastoma (36%). The frequency of IDH1 mutations in recurrent glioblastomas was nearly twice that in primary glioblastomas. TP53 mutations were fewer in proneural recurrent glioblastomas (20%) but frequent in classical recurrent glioblastomas (80%). The most common sites of recurrent glioblastomas were the temporal lobe (41%). In patients diagnosed with recurrent glioblastoma multiforme, 64% were younger than 50 years. Gene set enrichment analysis revealed that chromatin fracture, repair, and remodeling genes were enriched in recurrent glioblastoma. Our results highlight the differences in clinical features, molecular subtypes and gene alterations between primary and recurrent glioblastoma and may be helpful for targeted therapy for recurrent glioblastoma.

Keywords: clinical features; molecular characteristics; primary glioblastoma; recurrent glioblastoma.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Antineoplastic Agents / therapeutic use
  • Biomarkers, Tumor / genetics*
  • Brain Neoplasms / drug therapy
  • Brain Neoplasms / genetics*
  • Brain Neoplasms / pathology*
  • China
  • DNA Damage
  • DNA Helicases / genetics
  • DNA Mutational Analysis
  • Databases, Genetic
  • ErbB Receptors / genetics
  • Female
  • Gene Expression Profiling
  • Gene Frequency
  • Genetic Predisposition to Disease
  • Glioblastoma / drug therapy
  • Glioblastoma / genetics*
  • Glioblastoma / pathology*
  • Humans
  • Isocitrate Dehydrogenase / genetics
  • Male
  • Middle Aged
  • Molecular Targeted Therapy
  • Mutation
  • Neoplasm Recurrence, Local*
  • Nuclear Proteins / genetics
  • Phenotype
  • Predictive Value of Tests
  • Risk Factors
  • Tumor Suppressor Protein p53 / genetics
  • X-linked Nuclear Protein

Substances

  • Antineoplastic Agents
  • Biomarkers, Tumor
  • Nuclear Proteins
  • TP53 protein, human
  • Tumor Suppressor Protein p53
  • Isocitrate Dehydrogenase
  • IDH1 protein, human
  • EGFR protein, human
  • ErbB Receptors
  • DNA Helicases
  • ATRX protein, human
  • X-linked Nuclear Protein