Bioinformatics Prediction and In Vitro Analysis Revealed That miR-17 Targets Cyclin D1 mRNA in Triple Negative Breast Cancer Cells

Chem Biol Drug Des. 2016 Mar;87(3):317-20. doi: 10.1111/cbdd.12671. Epub 2015 Nov 2.

Abstract

Breast cancer is one of the most prevalent malignancies among women worldwide. Triple negative breast cancer (TNBC) is a type of breast cancer in which estrogen receptor, progesterone receptor, and human epidermal growth factor receptor 2 (HER-2) are not expressed. There is no targeted therapy for this type of cancer, and available therapies have poor therapeutic effects. Performing a preliminary research, we selected cyclin D1 (CCND1) gene of Wnt signaling pathway which is a target of miRNAs, a promising set of biomolecules in diagnosis and treatment of breast cancer. In this study using bioinformatic analyses, miR-17 was selected as it targets the 3'UTR of CCND1 gene with the highest score. Luciferase assay results also confirmed the bioinformatic prediction. Decreased expression of miR-17 in MDA-MB-231 cell line was observed using qRT-PCR method. After lentiviral transduction of miR-17 to the target cells, gene expression analysis showed decreased expression of CCND1 gene. We found miR-17 as an attractive molecule that after intensive research can probably be used as a biomarker in TNBC.

Keywords: CCND1 gene; luciferase assay; miRNA; quantitative real-time RT-PCR; triple negative breast cancer.

Publication types

  • Editorial
  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Computational Biology*
  • Cyclin D1 / genetics*
  • Female
  • HEK293 Cells
  • Humans
  • In Vitro Techniques
  • MicroRNAs / genetics*
  • RNA, Messenger / genetics*
  • Triple Negative Breast Neoplasms / genetics*

Substances

  • MIRN17 microRNA, human
  • MicroRNAs
  • RNA, Messenger
  • Cyclin D1

Associated data

  • GENBANK/NC_000001.11