ETV6-LPXN fusion transcript generated by t(11;12)(q12.1;p13) in a patient with relapsing acute myeloid leukemia with NUP98-HOXA9

Genes Chromosomes Cancer. 2016 Mar;55(3):242-50. doi: 10.1002/gcc.22327. Epub 2015 Nov 6.

Abstract

ETV6, which encodes an ETS family transcription factor, is frequently rearranged in human leukemias. We show here that a patient with acute myeloid leukemia with t(7;11)(p15;p15) gained, at the time of relapse, t(11;12)(q12.1;p13) with a split ETV6 FISH signal. Using 3'-RACE PCR analysis, we found that ETV6 was fused to LPXN at 11q12.1, which encodes leupaxin. ETV6-LPXN, an in-frame fusion between exon 4 of ETV6 and exon 2 of LPXN, did not transform the interleukin-3-dependent 32D myeloid cell line to cytokine independence; however, an enhanced proliferative response was observed when these cells were treated with G-CSF without inhibition of granulocytic differentiation. The 32D and human leukemia cell lines each transduced with ETV6-LPXN showed enhanced migration towards the chemokine CXCL12. We show here for the first time that LPXN is a fusion partner of ETV6 and present evidence indicating that ETV6-LPXN plays a crucial role in leukemia progression through enhancing the response to G-CSF and CXCL12.

Publication types

  • Case Reports

MeSH terms

  • Aged
  • Amino Acid Sequence
  • Base Sequence
  • Cell Adhesion Molecules / genetics*
  • Chromosomes, Human, Pair 11
  • Chromosomes, Human, Pair 12
  • ETS Translocation Variant 6 Protein
  • Gene Fusion
  • Homeodomain Proteins / genetics*
  • Humans
  • Leukemia, Myeloid, Acute / genetics*
  • Male
  • Nuclear Pore Complex Proteins / genetics*
  • Oncogene Proteins, Fusion / genetics*
  • Phosphoproteins / genetics*
  • Proto-Oncogene Proteins c-ets / genetics*
  • Repressor Proteins / genetics*
  • Translocation, Genetic*

Substances

  • Cell Adhesion Molecules
  • Homeodomain Proteins
  • LPXN protein, human
  • Nuclear Pore Complex Proteins
  • Nup98 protein, human
  • Oncogene Proteins, Fusion
  • Phosphoproteins
  • Proto-Oncogene Proteins c-ets
  • Repressor Proteins
  • homeobox protein HOXA9