Identification of two rare and novel large deletions in ITGB4 gene causing epidermolysis bullosa with pyloric atresia

Exp Dermatol. 2016 Apr;25(4):269-74. doi: 10.1111/exd.12938. Epub 2016 Feb 13.

Abstract

Epidermolysis bullosa with pyloric atresia (EB-PA) is a rare autosomal recessive hereditary disease with a variable prognosis from lethal to very mild. EB-PA is classified into Simplex form (EBS-PA: OMIM #612138) and Junctional form (JEB-PA: OMIM #226730), and it is caused by mutations in ITGA6, ITGB4 and PLEC genes. We report the analysis of six patients with EB-PA, including two dizygotic twins. Skin immunofluorescence epitope mapping was performed followed by PCR and direct sequencing of the ITGB4 gene. Two of the patients presented with non-lethal EB-PA associated with missense ITGB4 gene mutations. For the other four, early postnatal demise was associated with complete lack of β4 integrin due to a variety of ITGB4 novel mutations (2 large deletions, 1 splice-site mutation and 3 missense mutations). One of the deletions spanned 278 bp, being one of the largest reported to date for this gene. Remarkably, we also found for the first time a founder effect for one novel mutation in the ITGB4 gene. We have identified 6 novel mutations in the ITGB4 gene to be added to the mutation database. Our results reveal genotype-phenotype correlations that contribute to the molecular understanding of this heterogeneous disease, a pivotal issue for prognosis and for the development of novel evidence-based therapeutic options for EB management.

Keywords: ITGB4 mutations; epidermolysis bullosa; genodermatoses; inherited skin diseases; pyloric atresia.

Publication types

  • Case Reports
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Biopsy
  • Child, Preschool
  • DNA Mutational Analysis
  • Ectodermal Dysplasia / diagnosis
  • Ectodermal Dysplasia / genetics*
  • Epitope Mapping
  • Epitopes / chemistry
  • Female
  • Genetic Association Studies
  • Humans
  • Infant
  • Infant, Newborn
  • Integrin beta4 / genetics*
  • Keratinocytes / cytology
  • Male
  • Microsatellite Repeats / genetics
  • Microscopy, Fluorescence
  • Mutation, Missense
  • Polymerase Chain Reaction
  • Prognosis
  • Sequence Analysis, DNA
  • Sequence Deletion*
  • Twins, Dizygotic

Substances

  • Epitopes
  • ITGB4 protein, human
  • Integrin beta4

Supplementary concepts

  • Epidermolysis bullosa with pyloric atresia

Associated data

  • GENBANK/NM_000213.3
  • GENBANK/NM_001005731.1