Association of RAC1 Gene Polymorphisms with Primary End-Stage Renal Disease in Chinese Renal Recipients

PLoS One. 2016 Feb 3;11(2):e0148270. doi: 10.1371/journal.pone.0148270. eCollection 2016.

Abstract

Background/objective: RAC1 gene could influence susceptibility to renal failure by altering the activity and expression of Rac1, which is a member of the Rho family of small GTP-binding proteins. In clinical practice, renal transplantation provides the optimal treatment for people with end-stage renal disease (ESRD). The objective of this present study was to determine whether the RAC1 gene polymorphisms were associated with primary ESRD susceptibility in Chinese renal recipients.

Methods: Six single nucleotide polymorphisms (SNPs) of RAC1 gene, including rs836488 T>C, rs702482 A>T, rs10951982 G>A, rs702483 A>G, rs6954996 G>A, and rs9374 G>A, were genotyped in 300 renal transplant recipients (cases) and 998 healthy Chinese subjects (controls) by using TaqMan SNP genotyping assay. Allele, genotype, and haplotype frequencies of the six SNPs were compared between cases and controls. Odds ratios (OR) and 95% confidence intervals (CI) were calculated in logistic regression models to evaluate the associations of the six SNPs with ESRD risk.

Results: The genotype distributions for the six SNPs in controls were consistent with Hardy-Weinberg equilibrium (P > 0.05). Association analysis revealed that three SNPs were significantly associated with ESRD risk. Positive associations with ESRD risk were found for the rs836488, rs702482, and rs702483 in the co-dominant model (minor allele homozygotes versus major allele homozygotes); specifically, the frequencies of the minor allele homozygotes and the minor allele for the three SNPs were higher in the cases than in the controls. In addition, these three SNPs also had associations with increased ESRD risk under the additive model (P < 0.05), and positive associations were also found for the rs836488 in the dominant model (P < 0.05) and for the rs702483 in the recessive model (P < 0.05). All these associations were independent of confounding factors. The other three SNPs (rs10951982, rs6954996, and rs9374), in all comparison models, were not associated with ESRD risk (P > 0.05). In haplotype analysis, carriers with "C-T-G-G-G-G" haplotype had a significantly higher risk of ESRD compared with the most common haplotype "T-A-G-A-G-G" (P = 0.011, OR = 1.46, 95% CI = 1.09-1.94).

Conclusion: This study suggested that polymorphisms of RAC1 gene might influence the susceptibility to ESRD in Chinese Han population. Further studies are necessary to confirm our findings.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adult
  • Alleles
  • Asian People / genetics*
  • Base Sequence
  • Case-Control Studies
  • China
  • Female
  • Gene Frequency / genetics
  • Genetic Association Studies
  • Genetic Markers / genetics
  • Genetic Predisposition to Disease*
  • Genotype
  • Humans
  • Kidney / pathology
  • Kidney Failure, Chronic / genetics*
  • Kidney Transplantation
  • Linkage Disequilibrium / genetics
  • Male
  • Polymorphism, Single Nucleotide / genetics
  • Sequence Analysis, DNA
  • Transplant Recipients*
  • rac1 GTP-Binding Protein / genetics*

Substances

  • Genetic Markers
  • RAC1 protein, human
  • rac1 GTP-Binding Protein

Grants and funding

This work was supported by the National Natural Science Foundation of China (grant number 81273591), the Natural Science Foundation of Hubei Province (P.R. China) (grant number 2009CDB380), and the Fundamental Research Funds for the Central Universities (P.R. China) (grant number 2014YGYL003). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.