High Resolution Melting Analysis Targeting hsp70 as a Fast and Efficient Method for the Discrimination of Leishmania Species

PLoS Negl Trop Dis. 2016 Feb 29;10(2):e0004485. doi: 10.1371/journal.pntd.0004485. eCollection 2016 Feb.

Abstract

Background: Protozoan parasites of the genus Leishmania cause a large spectrum of clinical manifestations known as Leishmaniases. These diseases are increasingly important public health problems in many countries both within and outside endemic regions. Thus, an accurate differential diagnosis is extremely relevant for understanding epidemiological profiles and for the administration of the best therapeutic protocol.

Methods/principal findings: Exploring the High Resolution Melting (HRM) dissociation profiles of two amplicons using real time polymerase chain reaction (real-time PCR) targeting heat-shock protein 70 coding gene (hsp70) revealed differences that allowed the discrimination of genomic DNA samples of eight Leishmania species found in the Americas, including Leishmania (Leishmania) infantum chagasi, L. (L.) amazonensis, L. (L.) mexicana, L. (Viannia) lainsoni, L. (V.) braziliensis, L. (V.) guyanensis, L. (V.) naiffi and L. (V.) shawi, and three species found in Eurasia and Africa, including L. (L.) tropica, L. (L.) donovani and L. (L.) major. In addition, we tested DNA samples obtained from standard promastigote culture, naturally infected phlebotomines, experimentally infected mice and clinical human samples to validate the proposed protocol.

Conclusions/significance: HRM analysis of hsp70 amplicons is a fast and robust strategy that allowed for the detection and discrimination of all Leishmania species responsible for the Leishmaniases in Brazil and Eurasia/Africa with high sensitivity and accuracy. This method could detect less than one parasite per reaction, even in the presence of host DNA.

Publication types

  • Evaluation Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Base Sequence
  • DNA, Protozoan / chemistry
  • DNA, Protozoan / genetics
  • HSP72 Heat-Shock Proteins / chemistry
  • HSP72 Heat-Shock Proteins / genetics*
  • Humans
  • Leishmania / chemistry
  • Leishmania / genetics
  • Leishmania / isolation & purification*
  • Leishmaniasis
  • Mice
  • Mice, Inbred BALB C
  • Molecular Sequence Data
  • Protozoan Proteins / chemistry
  • Protozoan Proteins / genetics*
  • Real-Time Polymerase Chain Reaction / methods*
  • Sequence Analysis, DNA
  • Transition Temperature

Substances

  • DNA, Protozoan
  • HSP72 Heat-Shock Proteins
  • Protozoan Proteins

Grants and funding

This work was funded by: Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP) www.fapesp.br; and Conselho Nacional para o Desenvolvimento Científico e Tecnológico (CNPq) www.cnpq.br. The funders had no role in study design, data collection and analysis, decision to publish or preparation of the manuscript.