Genetic risk of TNFSF4 and FAM167A-BLK polymorphisms in children with asthma and allergic rhinitis in a Han Chinese population

J Asthma. 2016 Aug;53(6):567-75. doi: 10.3109/02770903.2015.1108437. Epub 2016 Apr 18.

Abstract

Background: Asthma and allergic rhinitis (AR) frequently occur as comorbid diseases of the upper airways. Single-nucleotide polymorphisms (SNPs) in the TNFSF4 and FAM167A-BLK genes have recently been shown to be associated with various immune-related disorders.

Objective: Our aim was to determine whether TNFSF4 or FAM167A-BLK polymorphisms confer genetic susceptibility to asthma and AR in a Han Chinese population.

Methods: We performed a case-control study of 290 asthmatic children and 252 healthy controls. Nine SNPs in the TNFSF4 region (rs1234313, rs1234314, rs1234315, rsl 2039904, rs844648 and rsl 0912580) and the FAM167A-BLK region (rs2254546, rs13277113 and rs1600249) were detected using the polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) assay.

Results: This study revealed that three SNPs in TNFSF4 (rsl 234313, rsl 234314 and rsl 234315) and two SNPs in FAM167A-BLK (rs2254546 and rsl 600249) were significantly correlated with asthma and AR, while SNP rsl600249 was associated with asthma without allergic rhinitis as a risk factor. Further, we demonstrated synergistic effects between the TNFSF4 and FAM167A-BLK SNPs.

Conclusion: This study supports that the SNPs in TNFSF4 and FAM167A-BLK may be involved in asthma and AR gene risk in the Han Chinese cohort.

Keywords: Allergic rhinitis; FAM167A-BLK; TNFSF4; asthma; polymorphisms.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Asian People / genetics*
  • Asthma / etiology
  • Asthma / genetics*
  • Case-Control Studies
  • Child
  • Child, Preschool
  • Epistasis, Genetic
  • Female
  • Genotype
  • Haplotypes
  • Humans
  • Infant
  • Male
  • OX40 Ligand / genetics*
  • Polymorphism, Single Nucleotide*
  • Proteins / genetics*
  • Rhinitis, Allergic / etiology
  • Rhinitis, Allergic / genetics*
  • Risk

Substances

  • FAM167A protein, human
  • OX40 Ligand
  • Proteins
  • TNFSF4 protein, human