Study of apoptosis-related interactions in colorectal cancer

Tumour Biol. 2016 Nov;37(11):14415-14425. doi: 10.1007/s13277-016-5363-9. Epub 2016 Sep 15.

Abstract

Abnormalities in apoptotic functions contribute to the pathogenesis of colorectal cancer. In this study, molecular interactions behind the apoptotic regulation have been explored. For this purpose, enrichment analysis was performed considering microRNAs (miRNAs) that putatively target TP53 and altered during colon cancer. This revealed gene associated with both TP53 and miRNAs. Further analysis showed that a significant molecular interaction between the shortlisted candidates (TP53, miR-143, KRAS, BCL2, and PLK1) exists. Mutation study was conducted to confirm the clinical relevance of candidates. It showed that the mutation extent does not significantly alter survival in patients thus making these candidates suitable as drug targets. Overall, we showed the importance of interactions between TP53, miR-143, KRAS, BCL2, and PLK1 with respect to colorectal cancer using bioinformatics approach.

Keywords: Apoptosis; Colorectal cancer; TP53; miRNA.

Publication types

  • Review

MeSH terms

  • Apoptosis / genetics*
  • Cell Cycle Proteins / genetics*
  • Cell Proliferation
  • Colon / pathology
  • Colorectal Neoplasms / genetics*
  • Colorectal Neoplasms / pathology
  • Gene Expression Regulation, Neoplastic
  • Humans
  • MicroRNAs / genetics*
  • Mutation / genetics
  • Polo-Like Kinase 1
  • Protein Serine-Threonine Kinases / genetics*
  • Proto-Oncogene Proteins / genetics*
  • Proto-Oncogene Proteins c-bcl-2 / genetics*
  • Proto-Oncogene Proteins p21(ras) / genetics*
  • Signal Transduction
  • Tumor Suppressor Protein p53 / genetics*

Substances

  • BCL2 protein, human
  • Cell Cycle Proteins
  • MIRN143 microRNA, human
  • MicroRNAs
  • Proto-Oncogene Proteins
  • Proto-Oncogene Proteins c-bcl-2
  • TP53 protein, human
  • Tumor Suppressor Protein p53
  • Protein Serine-Threonine Kinases
  • Proto-Oncogene Proteins p21(ras)