Acetylation of lysine ϵ-amino groups regulates aminoacyl-tRNA synthetase activity in Escherichia coli

J Biol Chem. 2017 Jun 23;292(25):10709-10722. doi: 10.1074/jbc.M116.770826. Epub 2017 Apr 28.

Abstract

Previous proteomic analyses have shown that aminoacyl-tRNA synthetases in many organisms can be modified by acetylation of Lys. In this present study, leucyl-tRNA synthetase and arginyl-tRNA synthetase from Escherichia coli (EcLeuRS and EcArgRS) were overexpressed and purified and found to be acetylated on Lys residues by MS. Gln scanning mutagenesis revealed that Lys619, Lys624, and Lys809 in EcLeuRS and Lys126 and Lys408 in EcArgRS might play important roles in enzyme activity. Furthermore, we utilized a novel protein expression system to obtain enzymes harboring acetylated Lys at specific sites and investigated their catalytic activity. Acetylation of these Lys residues could affect their aminoacylation activity by influencing amino acid activation and/or the affinity for tRNA. In vitro assays showed that acetyl-phosphate nonenzymatically acetylates EcLeuRS and EcArgRS and suggested that the sirtuin class deacetylase CobB might regulate acetylation of these two enzymes. These findings imply a potential regulatory role for Lys acetylation in controlling the activity of aminoacyl-tRNA synthetases and thus protein synthesis.

Keywords: acetylation; amino acid; aminoacyl tRNA synthetase; catalysis; transfer RNA (tRNA); translation.

MeSH terms

  • Acetylation
  • Arginine-tRNA Ligase / chemistry*
  • Arginine-tRNA Ligase / genetics
  • Arginine-tRNA Ligase / metabolism
  • Enzyme Activation
  • Escherichia coli / enzymology*
  • Escherichia coli / genetics
  • Escherichia coli Proteins / chemistry*
  • Escherichia coli Proteins / genetics
  • Escherichia coli Proteins / metabolism
  • Leucine-tRNA Ligase / chemistry*
  • Leucine-tRNA Ligase / genetics
  • Leucine-tRNA Ligase / metabolism
  • Lysine / chemistry
  • Lysine / genetics
  • Lysine / metabolism
  • Sirtuins / chemistry*
  • Sirtuins / genetics
  • Sirtuins / metabolism

Substances

  • Escherichia coli Proteins
  • Sirtuins
  • cobB protein, E Coli
  • Arginine-tRNA Ligase
  • Leucine-tRNA Ligase
  • Lysine

Associated data

  • PDB/4ARC
  • PDB/2ZUE