Differential Expression Profile of ZFX Variants Discriminates Breast Cancer Subtypes

Iran Biomed J. 2019 Jan;23(1):47-56. doi: 10.29252/.23.1.47. Epub 2018 May 13.

Abstract

Background: ZFX is a transcriptional regulator in embryonic stem cells and plays an important role in pluripotency and self-renewal. ZFX is widely expressed in pluripotent stem cells and is down-regulated during differentiation of embryonic stem cells. ZFX has five different variants that encode three different protein isoforms. While several reports have determined the overexpression of ZFX in a variety of somatic cancers, the expression of ZFX-spliced variants in cancer cells is not well-understood.

Methods: We investigated the expression of ZFX variants in a series of breast cancer tissues and cell lines using quantitative PCR.

Results: The expression of ZFX variant 1/3 was higher in tumor tissue compared to marginal tissue. In contrast, the ZFX variant 5 was down-regulated in tumor tissues. While the ZFX variant 1/3 and ZFX variant 5 expression significantly increased in low-grade tumors, ZFX variant 4 was strongly expressed in high-grade tumors, demonstrating lymphatic invasion. In addition, our result revealed a significant association between the HER2 status and the expression of ZFX-spliced variants.

Conclusion: Our data suggest that the expression of ZFX-spliced transcripts varies between different types of breast cancer and may contribute to their tumorigenesis process. Hence, ZFX-spliced transcripts could be considered as novel tumor markers with a probable value in diagnosis, prognosis, and therapy of breast cancer.

Keywords: Breast neoplasms; Neoplastic stem cells; RNA splicing.

MeSH terms

  • Breast Neoplasms / classification*
  • Breast Neoplasms / genetics*
  • Breast Neoplasms / pathology
  • Carcinoma, Ductal, Breast / genetics
  • Carcinoma, Ductal, Breast / pathology
  • Cell Differentiation / genetics
  • Cell Line, Tumor
  • Exons / genetics
  • Female
  • Gene Expression Profiling*
  • Gene Expression Regulation, Neoplastic*
  • Humans
  • Kruppel-Like Transcription Factors / genetics*
  • Kruppel-Like Transcription Factors / metabolism
  • Middle Aged
  • Neoplasm Grading
  • Protein Isoforms / genetics
  • Protein Isoforms / metabolism

Substances

  • Kruppel-Like Transcription Factors
  • Protein Isoforms
  • zinc finger protein, X-linked