Ubiquitination of ABCE1 by NOT4 in Response to Mitochondrial Damage Links Co-translational Quality Control to PINK1-Directed Mitophagy

Cell Metab. 2018 Jul 3;28(1):130-144.e7. doi: 10.1016/j.cmet.2018.05.007. Epub 2018 May 31.

Abstract

Translation of mRNAs is tightly regulated and constantly surveyed for errors. Aberrant translation can trigger co-translational protein and RNA quality control processes, impairments of which cause neurodegeneration by still poorly understood mechanism(s). Here we show that quality control of translation of mitochondrial outer membrane (MOM)-localized mRNA intersects with the turnover of damaged mitochondria, both orchestrated by the mitochondrial kinase PINK1. Mitochondrial damage causes stalled translation of complex-I 30 kDa subunit (C-I30) mRNA on MOM, triggering the recruitment of co-translational quality control factors Pelo, ABCE1, and NOT4 to the ribosome/mRNA-ribonucleoprotein complex. Damage-induced ubiquitination of ABCE1 by NOT4 generates poly-ubiquitin signals that attract autophagy receptors to MOM to initiate mitophagy. In the Drosophila PINK1 model, these factors act synergistically to restore mitophagy and neuromuscular tissue integrity. Thus ribosome-associated co-translational quality control generates an early signal to trigger mitophagy. Our results have broad therapeutic implications for the understanding and treatment of neurodegenerative diseases.

Keywords: ABCE1; NOT4; PINK1; autophagy receptor recruitment; co-translational quality control; mitochondrial quality control; mitophagy; ribosome stalling; ribosome/mRNP remodeling; ubiquitination.

MeSH terms

  • ATP-Binding Cassette Transporters / metabolism*
  • Animals
  • Drosophila
  • Drosophila Proteins / genetics
  • Endonucleases / metabolism
  • HeLa Cells
  • Humans
  • Mitochondria / metabolism*
  • Mitochondrial Proteins / metabolism
  • Mitophagy / genetics*
  • Neurodegenerative Diseases / metabolism
  • Nuclear Proteins / metabolism
  • Protein Kinases / genetics
  • Protein Kinases / metabolism*
  • Protein Serine-Threonine Kinases / genetics
  • RNA, Messenger / metabolism
  • Ribonucleoproteins / metabolism
  • Ribosomes / metabolism
  • Transcription Factors / metabolism*
  • Ubiquitination*

Substances

  • ABCE1 protein, human
  • ATP-Binding Cassette Transporters
  • CNOT4 protein, human
  • Drosophila Proteins
  • Mitochondrial Proteins
  • Nuclear Proteins
  • RNA, Messenger
  • Ribonucleoproteins
  • Transcription Factors
  • Protein Kinases
  • PINK1 protein, Drosophila
  • PTEN-induced putative kinase
  • Protein Serine-Threonine Kinases
  • Endonucleases
  • pelo protein, human