A novel homozygous nonsense mutation of VPS13B associated with previously unreported features of Cohen syndrome

Am J Med Genet A. 2020 Mar;182(3):570-575. doi: 10.1002/ajmg.a.61435. Epub 2019 Dec 11.

Abstract

Cohen syndrome (CS) is a rare autosomal recessive disorder associated with mutations in the vacuolar protein sorting 13 homolog B (VPS13B; formerly COH1) gene. The core clinical phenotype comprises a characteristic facial gestalt, marked developmental delay, and myopia. Additional, nonobligatory features include obesity, microcephaly, short stature, muscular hypotonia, scoliosis, narrow hands and feet, progressive retinopathy, as well as neutropenia. Here we report a novel homozygous nonsense mutation in the VPS13B gene and previously undescribed clinical features in a 19-year-old woman with developmental delay, intellectual disability, and a particular facial appearance. The patient showed several features consistent with CS. In addition, the parents observed congenital alacrima and anhidrosis persisting until onset of puberty. The diagnosis was not established based on the clinical phenotype. We performed whole-genome sequencing and identified a novel homozygous nonsense mutation c.62T>G (NM_152564.4), p.(Leu21*) in the VPS13B gene. Our findings extended the previously reported phenotype of CS. We conclude that transient, prepubertal alacrima and anhidrosis are part of the phenotypic spectrum of CS associated with a novel homozygous nonsense mutation in the VPS13B gene.

Keywords: VPS13B gene; Cohen syndrome; prepubertal alacrima; prepubertal anhidrosis.

Publication types

  • Case Reports
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Abnormalities, Multiple / diagnosis
  • Abnormalities, Multiple / genetics
  • Abnormalities, Multiple / pathology
  • Adult
  • Brain / diagnostic imaging
  • Brain / pathology
  • Child
  • Child, Preschool
  • Codon, Nonsense / genetics
  • Developmental Disabilities / diagnosis
  • Developmental Disabilities / diagnostic imaging
  • Developmental Disabilities / genetics*
  • Developmental Disabilities / pathology
  • Female
  • Fingers / abnormalities*
  • Fingers / diagnostic imaging
  • Fingers / pathology
  • Genetic Predisposition to Disease*
  • Homozygote
  • Humans
  • Intellectual Disability / diagnosis
  • Intellectual Disability / diagnostic imaging
  • Intellectual Disability / genetics*
  • Intellectual Disability / pathology
  • Male
  • Microcephaly / diagnosis
  • Microcephaly / diagnostic imaging
  • Microcephaly / genetics*
  • Microcephaly / pathology
  • Muscle Hypotonia / diagnosis
  • Muscle Hypotonia / diagnostic imaging
  • Muscle Hypotonia / genetics*
  • Muscle Hypotonia / pathology
  • Myopia / diagnosis
  • Myopia / diagnostic imaging
  • Myopia / genetics*
  • Myopia / pathology
  • Obesity / diagnosis
  • Obesity / diagnostic imaging
  • Obesity / genetics*
  • Obesity / pathology
  • Retinal Degeneration / diagnosis
  • Retinal Degeneration / diagnostic imaging
  • Retinal Degeneration / genetics*
  • Retinal Degeneration / pathology
  • Vesicular Transport Proteins / genetics*
  • Whole Genome Sequencing
  • Young Adult

Substances

  • Codon, Nonsense
  • VPS13B protein, human
  • Vesicular Transport Proteins

Supplementary concepts

  • Cohen syndrome