An integrated pan-cancer analysis of TFAP4 aberrations and the potential clinical implications for cancer immunity

J Cell Mol Med. 2021 Feb;25(4):2082-2097. doi: 10.1111/jcmm.16147. Epub 2020 Dec 29.

Abstract

Studies have shown that transcription factor activating enhancer binding protein 4 (TFAP4) plays a vital role in multiple types of cancer; however, the TFAP4 expression profile is still unknown, as is its value within the human pan-cancer analysis. The present study comprehensively analysed TFAP4 expression patterns from 33 types of malignancies, along with the significance of TFAP4 for prognosis prediction and cancer immunity. TFAP4 displayed inconsistent levels of gene expression across the diverse cancer cell lines, and displayed abnormal expression within most malignant tumours, which closely corresponded to overall survival. More importantly, the TFAP4 level was also significantly related to the degree of tumour infiltration. TFAP4 was correlated using gene markers in tumour-infiltrating immune cells and immune scores. TFAP4 expression was correlated with tumour mutation burden and microsatellite instability in different cancer types, and enrichment analyses identified TFAP4-associated terms and pathways. The present study comprehensively analysed the expression of TFAP4 across 33 distinct types of cancers, which revealed that TFAP4 may possibly play a vital role during cancer formation and development. TFAP4 is related to differing degrees of immune infiltration within cancers, which suggests the potential of TFAP4 as an immunotherapy target in cancers. Our study demonstrated that TFAP4 plays an important role in tumorigenesis as a prognostic biomarker, which highlights the possibility of developing new targeted treatments.

Keywords: TFAP4; immune infiltration; pan-cancer; prognostic biomarker.

MeSH terms

  • Biomarkers, Tumor*
  • Cell Line, Tumor
  • Computational Biology / methods
  • DNA-Binding Proteins / genetics*
  • DNA-Binding Proteins / metabolism
  • Gene Expression Regulation, Neoplastic*
  • Genetic Variation*
  • Humans
  • Immunity*
  • Immunomodulation
  • Lymphocytes, Tumor-Infiltrating / immunology
  • Lymphocytes, Tumor-Infiltrating / metabolism
  • Neoplasms / genetics*
  • Neoplasms / immunology*
  • Neoplasms / mortality
  • Neoplasms / pathology
  • Prognosis
  • Proportional Hazards Models
  • Survival Analysis
  • Transcription Factors / genetics*
  • Transcription Factors / metabolism

Substances

  • Biomarkers, Tumor
  • DNA-Binding Proteins
  • Transcription Factors
  • enhancer-binding protein AP-4