Targeted next-generation sequencing panel screening of 668 Chinese patients with non-obstructive azoospermia

J Assist Reprod Genet. 2021 Aug;38(8):1997-2005. doi: 10.1007/s10815-021-02154-9. Epub 2021 Mar 16.

Abstract

Purpose: We aimed (1) to determine the molecular diagnosis rate and the recurrent causative genes of patients with non-obstructive azoospermia (NOA) using targeted next-generation sequencing (NGS) panel screening and (2) to discuss whether these genes help in the prognosis for microsurgical testicular sperm extraction (micro-TESE).

Methods: We used NGS panels to screen 668 Chinese men with NOA. Micro-TESE outcomes for six patients with pathogenic mutations were followed up. Functional assays were performed for two NR5A1 variants identified: p.I224V and p.R281C.

Results: Targeted NGS panel sequencing could explain 4/189 (2.1% by panel 1) or 10/479 (2.1% by panel 2) of the patients with NOA after exclusion of karyotype abnormalities and Y chromosome microdeletions. Almost all mutations detected were newly described except for NR5A1 p.R281C and TEX11 p.M156V. Two missense NR5A1 mutations-p.R281C and p.I244V-were proved to be deleterious by in vitro functional assays. Mutations in TEX11, TEX14, and NR5A1 genes are recurrent causes of NOA, but each gene explains only a very small percentage (less than 4/668; 0.6%). Only the patient with NR5A1 mutations produced viable spermatozoa through micro-TESE, but other patients with TEX11 and TEX14 had poor micro-TESE prognoses.

Conclusions: A targeted NGS panel is a feasible diagnostic method for patients with NOA. Because each gene implicated explains only a small proportion of such cases, more genes should be included to further increase the diagnostic rate. Considering previous reports, we suggest that only a few genes that are directly linked to meiosis can indicate poor micro-TESE prognosis, such as TEX11, TEX14, and SYCE1.

Keywords: Male infertility; Microsurgical testicular sperm extraction; Next-generation sequencing; Non-obstructive azoospermia; Spermatogenesis.

MeSH terms

  • Adult
  • Azoospermia / diagnosis
  • Azoospermia / epidemiology
  • Azoospermia / genetics*
  • Azoospermia / pathology
  • Cell Cycle Proteins / genetics*
  • China / epidemiology
  • DNA-Binding Proteins / genetics*
  • High-Throughput Nucleotide Sequencing*
  • Humans
  • Male
  • Meiosis / genetics
  • Sperm Retrieval
  • Spermatozoa / metabolism
  • Spermatozoa / pathology
  • Testis / growth & development
  • Testis / metabolism
  • Transcription Factors / genetics*

Substances

  • Cell Cycle Proteins
  • DNA-Binding Proteins
  • SYCP1 protein, human
  • TEX11 protein, human
  • TEX14 protein, human
  • Transcription Factors

Supplementary concepts

  • Azoospermia, Nonobstructive