DDX6 is a positive regulator of Ataxin-2/PAPD4 cytoplasmic polyadenylation machinery

Biochem Biophys Res Commun. 2021 May 14:553:9-16. doi: 10.1016/j.bbrc.2021.03.066. Epub 2021 Mar 20.

Abstract

The RNA-binding protein Ataxin-2 regulates translation and mRNA stability through cytoplasmic polyadenylation of the targets. Here we newly identified DDX6 as a positive regulator of the cytoplasmic polyadenylation. Analysis of Ataxin-2 interactome using LC-MS/MS revealed prominent interaction with the DEAD-box RNA helicase DDX6. DDX6 interacted with components of the Ataxin-2 polyadenylation machinery; Ataxin-2, PABPC1 and PAPD4. As in the case for Ataxin-2 downregulation, DDX6 downregulation led to an increase in Ataxin-2 target mRNAs with short poly(A) tails as well as a reduction in their protein expression. In contrast, Ataxin-2 target mRNAs with short poly(A) tails were decreased by the overexpression of Ataxin-2, which was compromised by the DDX6 downregulation. However, polyadenylation induced by Ataxin-2 tethering was not affected by the DDX6 downregulation. Taken together, these results suggest that DDX6 positively regulates Ataxin-2-induced cytoplasmic polyadenylation to maintain poly(A) tail length of the Ataxin-2 targets provably through accelerating binding of Ataxin-2 to the target mRNAs.

Keywords: Ataxin-2; Cytoplasmic polyadenylation; DDX6; Polyglutamine disease.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Ataxin-2 / metabolism*
  • Chromatography, Liquid
  • Cytoplasm / metabolism*
  • DEAD-box RNA Helicases / metabolism*
  • HEK293 Cells
  • Humans
  • Poly A / genetics
  • Poly A / metabolism
  • Polyadenylation*
  • Polynucleotide Adenylyltransferase / metabolism*
  • Protein Binding
  • Protein Interaction Maps
  • Proto-Oncogene Proteins / metabolism*
  • RNA Stability
  • RNA, Messenger / genetics
  • RNA, Messenger / metabolism
  • Tandem Mass Spectrometry
  • mRNA Cleavage and Polyadenylation Factors / metabolism*

Substances

  • ATXN2 protein, human
  • Ataxin-2
  • Proto-Oncogene Proteins
  • RNA, Messenger
  • mRNA Cleavage and Polyadenylation Factors
  • Poly A
  • Polynucleotide Adenylyltransferase
  • TENT2 protein, human
  • DDX6 protein, human
  • DEAD-box RNA Helicases