Transcriptional control of CBX5 by the RNA binding proteins RBMX and RBMXL1 maintains chromatin state in myeloid leukemia

Nat Cancer. 2021 Jul:2:741-757. doi: 10.1038/s43018-021-00220-w. Epub 2021 Jul 5.

Abstract

RNA binding proteins (RBPs) are key arbiters of post-transcriptional regulation and are found to be found dysregulated in hematological malignancies. Here, we identify the RBP RBMX and its retrogene RBMXL1 to be required for murine and human myeloid leukemogenesis. RBMX/L1 are overexpressed in acute myeloid leukemia (AML) primary patients compared to healthy individuals, and RBMX/L1 loss delayed leukemia development. RBMX/L1 loss lead to significant changes in chromatin accessibility, as well as chromosomal breaks and gaps. We found that RBMX/L1 directly bind to mRNAs, affect transcription of multiple loci, including CBX5 (HP1α), and control the nascent transcription of the CBX5 locus. Forced CBX5 expression rescued the RBMX/L1 depletion effects on cell growth and apoptosis. Overall, we determine that RBMX/L1 control leukemia cell survival by regulating chromatin state through their downstream target CBX5. These findings identify a mechanism for RBPs directly promoting transcription and suggest RBMX/L1, as well as CBX5, as potential therapeutic targets in myeloid malignancies.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Chromatin* / genetics
  • Gene Expression Regulation
  • Heterogeneous-Nuclear Ribonucleoproteins / genetics
  • Humans
  • Leukemia, Myeloid, Acute* / genetics
  • Mice
  • RNA-Binding Proteins / genetics
  • Transcription Factors / genetics

Substances

  • Chromatin
  • Heterogeneous-Nuclear Ribonucleoproteins
  • RBMX protein, human
  • RNA-Binding Proteins
  • Transcription Factors