Novel variants in Krueppel like factor 1 that cause persistence of fetal hemoglobin in In(Lu) individuals

Sci Rep. 2021 Sep 17;11(1):18557. doi: 10.1038/s41598-021-97149-y.

Abstract

Beta-hemoglobinopathies become prominent after birth due to a switch from γ-globin to the mutated β-globin. Haploinsufficiency for the erythroid specific indispensable transcription factor Krueppel-like factor 1 (KLF1) is associated with high persistence of fetal hemoglobin (HPFH). The In(Lu) phenotype, characterized by low to undetectable Lutheran blood group expression is caused by mutations within KLF1 gene. Here we screened a blood donor cohort of 55 Lutheran weak or negative donors for KLF1 variants and evaluated their effect on KLF1 target gene expression. To discriminate between weak and negative Lutheran expression, a flow cytometry (FCM) assay was developed to detect Lu antigen expression. The Lu(a-b-) (negative) donor group, showing a significant decreased CD44 (Indian blood group) expression, also showed increased HbF and HbA2 levels, with one individual expressing HbF as high as 5%. KLF1 exons and promoter sequencing revealed variants in 80% of the Lutheran negative donors. Thirteen different variants plus one high frequency SNP (c.304 T > C) were identified of which 6 were novel. In primary erythroblasts, knockdown of endogenous KLF1 resulted in decreased CD44, Lu and increased HbF expression, while KLF1 over-expressing cells were comparable to wild type (WT). In line with the pleiotropic effects of KLF1 during erythropoiesis, distinct KLF1 mutants expressed in erythroblasts display different abilities to rescue CD44 and Lu expression and/or to affect fetal (HbF) or adult (HbA) hemoglobin expression. With this study we identified novel KLF1 variants to be include into blood group typing analysis. In addition, we provide further insights into the regulation of genes by KLF1.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Cell Adhesion Molecules / genetics*
  • Cells, Cultured
  • Erythroid Cells / cytology
  • Erythroid Cells / metabolism
  • Erythropoiesis
  • Fetal Hemoglobin / analysis*
  • Fetal Hemoglobin / genetics
  • Humans
  • Kruppel-Like Transcription Factors / genetics*
  • Lutheran Blood-Group System / genetics*
  • Mutation
  • Polymorphism, Single Nucleotide
  • gamma-Globins / analysis*
  • gamma-Globins / genetics

Substances

  • BCAM protein, human
  • Cell Adhesion Molecules
  • Kruppel-Like Transcription Factors
  • Lutheran Blood-Group System
  • erythroid Kruppel-like factor
  • gamma-Globins
  • Fetal Hemoglobin