N-terminal Ago-binding domain of GW182 contains a tryptophan-rich region that confer binding to the CCR4-NOT complex

Genes Cells. 2022 Sep;27(9):579-585. doi: 10.1111/gtc.12974. Epub 2022 Jul 24.

Abstract

GW182 family proteins are a key component of microRNA-protein complex eliciting translational repression and/or degradation of microRNA-targets. The microRNAs in complex with Argonaute proteins bind to target mRNAs, and GW182 proteins are recruited by association with Argonaute proteins. The GW182 protein acts as a scaffold that links the Argonaute protein to silencing machineries including the CCR4-NOT complex which accelerates deadenylation and inhibits translation. The carboxyl-terminal effector domain of GW182 protein, also called the silencing domain, has been shown to bind to the subunits of the CCR4-NOT complex, the CNOT1 and the CNOT9. Here we show that a small region within the amino-terminal Argonaute-binding domain of human GW182/TNRC6A can associate with the CCR4-NOT complex. This region resides between the two Argonaute-binding sites and contains reiterated GW/WG-motifs. Alanine mutation experiments showed that multiple tryptophan residues are required for the association with the CCR4-NOT complex. Furthermore, co-expression and immunoprecipitation assays suggested that the CNOT9 subunit of the CCR4-NOT complex is a possible binding partner of this region. Our work, taken together with previous studies, indicates that the human GW182 protein contains multiple binding interfaces to the CCR4-NOT complex.

Keywords: Argonaute; CCR4-NOT; CNOT3; CNOT9; GW/WG; GW182; TNRC6A; miRNA; tryptophan.

MeSH terms

  • Argonaute Proteins* / genetics
  • Argonaute Proteins* / metabolism
  • Autoantigens* / chemistry
  • Autoantigens* / genetics
  • Autoantigens* / metabolism
  • Binding Sites
  • Humans
  • MicroRNAs* / genetics
  • MicroRNAs* / metabolism
  • Protein Binding
  • RNA-Binding Proteins* / genetics
  • RNA-Binding Proteins* / metabolism
  • Receptors, CCR4 / genetics
  • Receptors, CCR4 / metabolism
  • Transcription Factors / metabolism
  • Tryptophan / genetics
  • Tryptophan / metabolism

Substances

  • Argonaute Proteins
  • Autoantigens
  • CCR4 protein, human
  • CNOT1 protein, human
  • MicroRNAs
  • RNA-Binding Proteins
  • Receptors, CCR4
  • TNRC6A protein, human
  • Transcription Factors
  • Tryptophan