Contributions of ARID5B, IKZF1, PIP4K2A, and GATA3 Gene Polymorphisms to Childhood Acute Lymphoblastic Leukemia in a Chinese Population

J Pediatr Hematol Oncol. 2023 Apr 1;45(3):123-129. doi: 10.1097/MPH.0000000000002646. Epub 2023 Mar 23.

Abstract

Various studies have shown that single nucleotide polymorphisms in the AT-rich interaction domain 5B (ARID5B), IKAROS family zinc finger 1 (IKZF1), phosphatidylinositol-5-phosphate 4-kinase type 2 alpha (PIP4K2A), and GATA binding protein 3 (GATA3) genes may be associated with the susceptibility and prognosis of childhood acute lymphoblastic leukemia (ALL). The present study aimed to investigate the association of ARID5B rs10821936, IKZF1 rs4132601, PIP4K2A rs7088318, and GATA3 rs3824662 gene polymorphisms with the susceptibility and prognosis of childhood ALL in China. We found that the C allele of rs10821936 (ARID5B) and the A allele of rs3824662 (GATA3) were associated with an increased risk of childhood ALL in the Chinese population. There was no significant difference in frequencies of rs4132601 (IKZF1) and rs7088318 (PIP4K2A) genotypes and alleles between the childhood ALL and control groups. We observed that CC genotype of rs10821936 (ARID5B) was associated with increased rates of high-risk and moderate-risk childhood ALL. The rs10821936 (ARID5B) could serve as a potential biomarker for assessing the risk of childhood ALL in Chinese children.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Case-Control Studies
  • Child
  • DNA-Binding Proteins* / genetics
  • East Asian People
  • GATA3 Transcription Factor / genetics
  • Genetic Predisposition to Disease
  • Humans
  • Ikaros Transcription Factor / genetics
  • Phosphates
  • Phosphotransferases (Alcohol Group Acceptor) / genetics
  • Polymorphism, Single Nucleotide
  • Precursor Cell Lymphoblastic Leukemia-Lymphoma* / genetics
  • Transcription Factors / genetics

Substances

  • DNA-Binding Proteins
  • Phosphates
  • Ikaros Transcription Factor
  • IKZF1 protein, human
  • GATA3 protein, human
  • GATA3 Transcription Factor
  • ARID5B protein, human
  • Transcription Factors
  • PIP4K2A protein, human
  • Phosphotransferases (Alcohol Group Acceptor)